RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 RNPS1Q15287 305 aaKnown RBP15.63■□□□□ 0.09
SCARB2-223ENST00000640640 ZNF468Q5VIY5 522 aaPredicted RBP15.63■□□□□ 0.09
SCARB2-223ENST00000640640 OR1J1Q8NGS3 322 aa15.63■□□□□ 0.09
SCARB2-223ENST00000640640 EGLN1Q9GZT9 426 aa15.63■□□□□ 0.09
SCARB2-223ENST00000640640 HIPK2Q9H2X6 1198 aa15.63■□□□□ 0.09
SCARB2-223ENST00000640640 OPA3Q9H6K4 179 aa15.63■□□□□ 0.09
SCARB2-223ENST00000640640 C17orf112F2Z3M2 114 aa15.62■□□□□ 0.09
SCARB2-223ENST00000640640 MNX1P50219 401 aaPredicted RBP15.62■□□□□ 0.09
SCARB2-223ENST00000640640 AGFG1P52594 562 aaKnown RBP15.62■□□□□ 0.09
SCARB2-223ENST00000640640 ZNF79Q15937 498 aa15.62■□□□□ 0.09
SCARB2-223ENST00000640640 JMJD6Q6NYC1 403 aaPredicted RBP15.62■□□□□ 0.09
SCARB2-223ENST00000640640 OR5M9Q8NGP3 310 aa15.62■□□□□ 0.09
SCARB2-223ENST00000640640 CT55Q8WUE5 264 aa15.62■□□□□ 0.09
SCARB2-223ENST00000640640 PPP1R3CQ9UQK1 317 aa15.62■□□□□ 0.09
SCARB2-223ENST00000640640 NKX6-3A6NJ46 265 aa15.62■□□□□ 0.09
SCARB2-223ENST00000640640 NDUFB7P17568 137 aa15.62■□□□□ 0.09
SCARB2-223ENST00000640640 MEOX1P50221 254 aa15.62■□□□□ 0.09
SCARB2-223ENST00000640640 RBMS3Q6XE24 437 aaKnown RBP15.62■□□□□ 0.09
SCARB2-223ENST00000640640 CCL3P10147 92 aa15.62■□□□□ 0.09
SCARB2-223ENST00000640640 CLPPQ16740 277 aaPredicted RBP15.62■□□□□ 0.09
SCARB2-223ENST00000640640 H2BFWTQ7Z2G1 175 aa15.62■□□□□ 0.09
SCARB2-223ENST00000640640 GCNT2Q8N0V5 402 aa15.62■□□□□ 0.09
SCARB2-223ENST00000640640 ZPLD1Q8TCW7 415 aa15.62■□□□□ 0.09
SCARB2-223ENST00000640640 EXTL1Q92935 676 aa15.62■□□□□ 0.09
SCARB2-223ENST00000640640 GP1BAP07359 652 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 IFITM3Q01628 133 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 DHRS2Q13268 280 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 SPINK14Q6IE38 97 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 FAM122BQ7Z309 247 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 ZNF808Q8N4W9 903 aaPredicted RBP15.61■□□□□ 0.09
SCARB2-223ENST00000640640 ZDHHC22Q8N966 263 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 PLEKHA2Q9HB19 425 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 LSM2Q9Y333 95 aaKnown RBP15.61■□□□□ 0.09
SCARB2-223ENST00000640640 SIRT4Q9Y6E7 314 aaPredicted RBP15.61■□□□□ 0.09
SCARB2-223ENST00000640640 RPS10-NUDT3A0A1W2PQS6 291 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 ANKRD20A5PA0PJZ0 165 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 E5RGE8 158 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 RPS10P46783 165 aaKnown RBP15.61■□□□□ 0.09
SCARB2-223ENST00000640640 PDCD1Q15116 288 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 HMGN3Q15651 99 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 ZBTB37Q5TC79 503 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 HES3Q5TGS1 186 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 H3F3CQ6NXT2 135 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 MUC20Q8N307 709 aaPredicted RBP15.61■□□□□ 0.09
SCARB2-223ENST00000640640 OR8B12Q8NGG6 310 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 SFT2D1Q8WV19 159 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 NSG2Q9Y328 171 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 TRAV8-7A0A075B6U6 113 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 AQP7P3A6NL99 342 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 A8MXE2 369 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 PLA2G10O15496 165 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 ZNF354AO60765 605 aaPredicted RBP15.61■□□□□ 0.09
SCARB2-223ENST00000640640 HLA-DOBP13765 273 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 OR3A4PP47883 348 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 GNG3P63215 75 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 NKX6-1P78426 367 aaPredicted RBP15.61■□□□□ 0.09
SCARB2-223ENST00000640640 GDF15Q99988 308 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 CHST6Q9GZX3 395 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 TERTO14746 1132 aaKnown RBP15.61■□□□□ 0.09
SCARB2-223ENST00000640640 GMDSO60547 372 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 ICMTO60725 284 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 KISS1RQ969F8 398 aaPredicted RBP15.61■□□□□ 0.09
SCARB2-223ENST00000640640 SSX3Q99909 188 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 KCNK15Q9H427 330 aa15.61■□□□□ 0.09
SCARB2-223ENST00000640640 ZNF236Q9UL36 1845 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 ENSAO43768 121 aaKnown RBP15.6■□□□□ 0.09
SCARB2-223ENST00000640640 LSM6P62312 80 aaKnown RBP15.6■□□□□ 0.09
SCARB2-223ENST00000640640 RAB11AP62491 216 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 PMS2CLQ68D20 193 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 BRICD5Q6PL45 260 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 SLC25A45Q8N413 288 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 DEFB124Q8NES8 71 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 KCNE5Q9UJ90 142 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 OR2B11Q5JQS5 317 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 TEX261Q6UWH6 196 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 LRRTM1Q86UE6 522 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 ST8SIA2Q92186 375 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 SLC25A32Q9H2D1 315 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 U3KQ87 197 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 HPP00738 406 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 LAIR2Q6ISS4 152 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 C20orf196Q8IYI0 205 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 ADPRHL1Q8NDY3 354 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 LIN37Q96GY3 246 aaPredicted RBP15.6■□□□□ 0.09
SCARB2-223ENST00000640640 ZNF230Q9UIE0 474 aaPredicted RBP15.6■□□□□ 0.09
SCARB2-223ENST00000640640 TRIP6Q15654 476 aaKnown RBP15.6■□□□□ 0.09
SCARB2-223ENST00000640640 PRAMEF5Q5TYX0 476 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 PRAMEF6Q5VXH4 476 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 RAB33BQ9H082 229 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 WDR54Q9H977 334 aa15.6■□□□□ 0.09
SCARB2-223ENST00000640640 PATJQ8NI35 1801 aa15.59■□□□□ 0.09
SCARB2-223ENST00000640640 RFPL4AA6NLU0 287 aa15.59■□□□□ 0.09
SCARB2-223ENST00000640640 RFPL4AL1F8VTS6 287 aa15.59■□□□□ 0.09
SCARB2-223ENST00000640640 CTSBP07858 339 aa15.59■□□□□ 0.09
SCARB2-223ENST00000640640 FAM74A1Q5RGS3 127 aa15.59■□□□□ 0.09
SCARB2-223ENST00000640640 OR2A2Q6IF42 318 aa15.59■□□□□ 0.09
SCARB2-223ENST00000640640 C6orf201Q7Z4U5 140 aa15.59■□□□□ 0.09
SCARB2-223ENST00000640640 ASB5Q8WWX0 329 aa15.59■□□□□ 0.09
SCARB2-223ENST00000640640 TIMM8BQ9Y5J9 83 aaPredicted RBP15.59■□□□□ 0.09
SCARB2-223ENST00000640640 M0R1B8 84 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms