RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 PAPOLGQ9BWT3 736 aaKnown RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 NOTCH4Q99466 2003 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 TOR1AO14656 332 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 HRH1P35367 487 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 SLC38A6Q8IZM9 456 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 LRRC18Q8N456 261 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 KCNRGQ8N5I3 272 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 OR11H7Q8NGC8 314 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 ABHD14BQ96IU4 210 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 GNRHR2Q96P88 292 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 LDLRAD4O15165 306 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 ST8SIA3O43173 380 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 IL2RAP01589 272 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 CD8AP01732 235 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 ABOP16442 354 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 GABRR1P24046 479 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 S100A10P60903 97 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 FAM209AQ5JX71 171 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 STOML3Q8TAV4 291 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 NUDCD2Q8WVJ2 157 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 ACKR4Q9NPB9 350 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 FLVCR2Q9UPI3 526 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 POMT1Q9Y6A1 747 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 V9GYS6 101 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 ZNF32P17041 273 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 BTCP35070 178 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 RPS23P62266 143 aaKnown RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 SNTB1Q13884 538 aaKnown RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 ZNF266Q14584 549 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 GPR157Q5UAW9 335 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 OR2M7Q8NG81 312 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 OR4D6Q8NGJ1 314 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 OR51A4Q8NGJ6 313 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 PSMF1Q92530 271 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 FBXW5Q969U6 566 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 OR2H1Q9GZK4 316 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 GPR160Q9UJ42 338 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 MYOFQ9NZM1 2061 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 SMAD9O15198 467 aaKnown RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 RRP8O43159 456 aaKnown RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 CNOT4O95628 575 aaKnown RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 HPXP02790 462 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 MYF5P13349 255 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 GCH1P30793 250 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 PPIAP62937 165 aaKnown RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 HIST1H3AP68431 136 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 HIST2H3PS2Q5TEC6 136 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 HIST2H3AQ71DI3 136 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 BAP18Q8IXM2 172 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 ZDHHC23Q8IYP9 409 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 FAM89BQ8N5H3 189 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 DVL3Q92997 716 aaPredicted RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 TMED3Q9Y3Q3 217 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 C9orf170A2RU37 121 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 MPZL1O95297 269 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 TIAF1O95411 115 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 CCNOP22674 350 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 PTGDSP41222 190 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 GNG3P63215 75 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 H3F3AP84243 136 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 CATR1Q13166 79 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 SIGIRRQ6IA17 410 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 PRSS54Q6PEW0 395 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 TRAT1Q6PIZ9 186 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 SLC7A5P1Q8MH63 180 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 LFNGQ8NES3 379 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 SLC5A7Q9GZV3 580 aa4.01□□□□□ -1.77
SCN1A-210ENST00000635776 MRPS18BQ9Y676 258 aaKnown RBP4.01□□□□□ -1.77
SCN1A-210ENST00000635776 MEIS3P1A6NDR6 274 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 OR7C1O76099 320 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 CD79AP11912 226 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 IL13RA2Q14627 380 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 WIPI1Q5MNZ9 446 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 ZNF695Q8IW36 515 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 FAM71E2Q8N5Q1 922 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 OR5A2Q8NGI9 324 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 GPR132Q9UNW8 380 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 LAMP3Q9UQV4 416 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 A0A1B0GTI1 187 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 PLSCR5A0PG75 271 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 E5RGE8 158 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 K7EPK0 472 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 TNFSF15O95150 251 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 SLC2A1P11166 492 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 H3F3CQ6NXT2 135 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 TMEM123Q8N131 208 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 ZADH2Q8N4Q0 377 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 OR51F2Q8NH61 342 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 SLC25A28Q96A46 364 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 ADAT3Q96EY9 351 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 SAT2Q96F10 170 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 NKX3-1Q99801 234 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 TINAGL1Q9GZM7 467 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 FAM212BQ9NTI7 297 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 KIF26AQ9ULI4 1882 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 NSG2Q9Y328 171 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 ZNF891A8MT65 544 aaPredicted RBP4□□□□□ -1.77
SCN1A-210ENST00000635776 RPL36A-HNRNPH2H7BZ11 118 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 UMODP07911 640 aa4□□□□□ -1.77
SCN1A-210ENST00000635776 SFTPBP07988 381 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms