RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 OR5V1Q9UGF6 321 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 FZR1Q9UM11 496 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 SS18L1O75177 396 aaPredicted RBP10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 COX6B1P14854 86 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 CCR6P51684 374 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 PSMA6P60900 246 aaKnown RBP10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 SPOCK1Q08629 439 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 SFRP5Q5T4F7 317 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 SKA3Q8IX90 412 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR11H4Q8NGC9 324 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR51D1Q8NGF3 324 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR51A4Q8NGJ6 313 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 SLC17A5Q9NRA2 495 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 ZNF275Q9NSD4 429 aaPredicted RBP10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 ZNF69Q9UC07 566 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 MGAQ8IWI9 3026 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 A0A0A6YYH2 397 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 IGHV3-64DA0A0J9YX35 117 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 LOC107986453A0A1B0GWG9 222 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 ANKRD34BA5PLL1 514 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 A6NJ64 397 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 RAD52P43351 418 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 TAS2R19P59542 299 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 RAB35Q15286 201 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 RNASE10Q5GAN6 216 aaKnown RBP10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 AWAT2Q6E213 333 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 BTN2A1Q7KYR7 527 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 DPPA2Q7Z7J5 298 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 HAVCR1Q96D42 359 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 MRPL15Q9P015 296 aaKnown RBP10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 RAB22AQ9UL26 194 aa10.87□□□□□ -0.67
SYNGAP1-207ENST00000628646 GMDSO60547 372 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 PEX14O75381 377 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 ZP1P60852 638 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 WDR38Q5JTN6 314 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 TFAP2EQ6VUC0 442 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 TMEM45BQ96B21 275 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 GINS4Q9BRT9 223 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 SCPEP1Q9HB40 452 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 HSPB11Q9Y547 144 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 LRRK2Q5S007 2527 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 FREM1Q5H8C1 2179 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 FREM2Q5SZK8 3169 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 DSPP15924 2871 aaKnown RBP10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 TRAV8-7A0A075B6U6 113 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 MBD3L4A6NDZ8 208 aaPredicted RBP10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 MBD3L3A6NE82 208 aaPredicted RBP10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 MBD3L5A6NJ08 208 aaPredicted RBP10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 SLC17A2O00624 439 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 TNFSF4P23510 183 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 KIR3DL2P43630 455 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 MEF2DQ14814 521 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 SLC26A10Q8NG04 563 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR1K1Q8NGR3 316 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 MBD3L2Q8NHZ7 208 aaPredicted RBP10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 SLC22A13Q9Y226 551 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 LRP12Q9Y561 859 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 HIVEP3Q5T1R4 2406 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 J3QKU1 62 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 CLDN14O95500 239 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 RAB3DO95716 219 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 UBBP0CG47 229 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 LSM6P62312 80 aaKnown RBP10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 H3F3AP84243 136 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 ALKBH6Q3KRA9 238 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 ZNF718Q3SXZ3 478 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 C6orf183Q5T699 404 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 RGS7BPQ6MZT1 257 aaPredicted RBP10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 SLC25A47Q6Q0C1 308 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 ADGRE4PQ86SQ3 457 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 GON7Q9BXV9 100 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR10A4Q9H209 315 aa10.86□□□□□ -0.67
SYNGAP1-207ENST00000628646 ETV2O00321 342 aaPredicted RBP10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 RAG2P55895 527 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 ZNF121P58317 390 aaPredicted RBP10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 SSBP1Q04837 148 aaKnown RBP10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 C4orf17Q53FE4 359 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 GLYATL3Q5SZD4 288 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 DOK3Q7L591 496 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 FGGYQ96C11 551 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 STARD4Q96DR4 205 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 MRPL22Q9NWU5 206 aaKnown RBP10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 SULT1C2O00338 296 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 ABCD4O14678 606 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 IGHMP01871 453 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 CST2P09228 141 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 DNASE1P24855 282 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 PRSS12P56730 875 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 TAS2R20P59543 309 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 FAM27BQ5VT28 67 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 FDX2Q6P4F2 183 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 ZIC4Q8N9L1 334 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 OR8H1Q8NGG4 311 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 HEXA-AS1Q9H8Q6 139 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 NOX3Q9HBY0 568 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 ZC4H2Q9NQZ6 224 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 NPTNQ9Y639 398 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 FAM230AA0A1W2PPH8 454 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 MT-ND4P03905 459 aa10.85□□□□□ -0.67
SYNGAP1-207ENST00000628646 IRF2P14316 349 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms