RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 LIPFP07098 398 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 CFL1P23528 166 aaKnown RBP13.63□□□□□ -0.23
LINC00628-201ENST00000628516 GSK3AP49840 483 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 CXCR4P61073 352 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 ZNF91Q05481 1191 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 IL18R1Q13478 541 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 SMN1Q16637 294 aaKnown RBP13.63□□□□□ -0.23
LINC00628-201ENST00000628516 IZUMO2Q6UXV1 221 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 PRSS45Q7RTY3 260 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 FAM90A1Q86YD7 464 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 C8orf59Q8N0T1 100 aaPredicted RBP13.63□□□□□ -0.23
LINC00628-201ENST00000628516 ASB17Q8WXJ9 295 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 TFAP2CQ92754 450 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 ZDHHC16Q969W1 377 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 MNTQ99583 582 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 ZNF747Q9BV97 191 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 SMURF1Q9HCE7 757 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 ZNF319Q9P2F9 582 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 IKZF2Q9UKS7 526 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 LRP12Q9Y561 859 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 TRRAPQ9Y4A5 3859 aa13.63□□□□□ -0.23
LINC00628-201ENST00000628516 A0A1W2PQL4 384 aaPredicted RBP13.62□□□□□ -0.23
LINC00628-201ENST00000628516 ZNF879B4DU55 563 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 MAGEB4O15481 346 aaPredicted RBP13.62□□□□□ -0.23
LINC00628-201ENST00000628516 TOX4O94842 621 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 SFTPBP07988 381 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 DBTP11182 482 aaKnown RBP13.62□□□□□ -0.23
LINC00628-201ENST00000628516 CFHR2P36980 270 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 GNALP38405 381 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 BPIFB3P59826 476 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 ISL1P61371 349 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 DEFB112Q30KQ8 113 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 TEX36Q5VZQ5 186 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 KCTD18Q6PI47 426 aaPredicted RBP13.62□□□□□ -0.23
LINC00628-201ENST00000628516 ZNF322Q6U7Q0 402 aaPredicted RBP13.62□□□□□ -0.23
LINC00628-201ENST00000628516 RHOUQ7L0Q8 258 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 SSX6Q7RTT6 188 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 WDR86Q86TI4 376 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 C11orf53Q8IXP5 236 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 PNLDC1Q8NA58 520 aaKnown RBP13.62□□□□□ -0.23
LINC00628-201ENST00000628516 CSNK2A3Q8NEV1 391 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 OR1M1Q8NGA1 313 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 LRRC29Q8WV35 223 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 LGALS12Q96DT0 336 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 OR8B4Q96RC9 309 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 PAPOLGQ9BWT3 736 aaKnown RBP13.62□□□□□ -0.23
LINC00628-201ENST00000628516 RHBDD3Q9Y3P4 386 aa13.62□□□□□ -0.23
LINC00628-201ENST00000628516 P2RY10O00398 339 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 DVL1O14640 695 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 TMPRSS2O15393 492 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 HOXA3O43365 443 aaPredicted RBP13.61□□□□□ -0.23
LINC00628-201ENST00000628516 OR2T7P0C7T2 308 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 CSNK2BP67870 215 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 ROM1Q03395 351 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 MICBQ29980 383 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 METTL11BQ5VVY1 283 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 RUSC1-AS1Q66K80 236 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 C16orf87Q6PH81 154 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 SHISA2Q6UWI4 295 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 BTN2A1Q7KYR7 527 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 OR2T27Q8NH04 317 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 ST8SIA4Q92187 359 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 TAF15Q92804 592 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC00628-201ENST00000628516 TBX15Q96SF7 602 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 MROQ9BYG7 248 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 RGCCQ9H4X1 137 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 PPP1R3EQ9H7J1 279 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 UNKLQ9H9P5 680 aaKnown RBP13.61□□□□□ -0.23
LINC00628-201ENST00000628516 RPL36Q9Y3U8 105 aaKnown RBP13.61□□□□□ -0.23
LINC00628-201ENST00000628516 HSPE1-MOB4S4R3N1 261 aa13.61□□□□□ -0.23
LINC00628-201ENST00000628516 ANXA2P2A6NMY6 339 aa13.6□□□□□ -0.23
LINC00628-201ENST00000628516 MMP9P14780 707 aa13.6□□□□□ -0.23
LINC00628-201ENST00000628516 MUC1P15941 1255 aaPredicted RBP13.6□□□□□ -0.23
LINC00628-201ENST00000628516 VHLP40337 213 aa13.6□□□□□ -0.23
LINC00628-201ENST00000628516 RIDAP52758 137 aaKnown RBP13.6□□□□□ -0.23
LINC00628-201ENST00000628516 IL13RA1P78552 427 aa13.6□□□□□ -0.23
LINC00628-201ENST00000628516 SNCBQ16143 134 aa13.6□□□□□ -0.23
LINC00628-201ENST00000628516 DEGS2Q6QHC5 323 aa13.6□□□□□ -0.23
LINC00628-201ENST00000628516 WDR82Q6UXN9 313 aa13.6□□□□□ -0.23
LINC00628-201ENST00000628516 ZNF679Q8IYX0 411 aa13.6□□□□□ -0.23
LINC00628-201ENST00000628516 FTMTQ8N4E7 242 aa13.6□□□□□ -0.23
LINC00628-201ENST00000628516 WDFY2Q96P53 400 aa13.6□□□□□ -0.23
LINC00628-201ENST00000628516 MICU1Q9BPX6 476 aa13.6□□□□□ -0.23
LINC00628-201ENST00000628516 TNFRSF19Q9NS68 423 aa13.6□□□□□ -0.23
LINC00628-201ENST00000628516 KAAG1Q9UBP8 84 aa13.6□□□□□ -0.23
LINC00628-201ENST00000628516 MRM2Q9UI43 246 aaKnown RBP13.6□□□□□ -0.23
LINC00628-201ENST00000628516 EXOGQ9Y2C4 368 aaKnown RBP13.6□□□□□ -0.23
LINC00628-201ENST00000628516 CENPVL3A0A0U1RRI6 287 aa13.59□□□□□ -0.23
LINC00628-201ENST00000628516 SRRM5B3KS81 715 aa13.59□□□□□ -0.23
LINC00628-201ENST00000628516 J3QRE1 110 aa13.59□□□□□ -0.23
LINC00628-201ENST00000628516 CDIPTO14735 213 aa13.59□□□□□ -0.23
LINC00628-201ENST00000628516 ZNF254O75437 659 aa13.59□□□□□ -0.23
LINC00628-201ENST00000628516 FCN3O75636 299 aa13.59□□□□□ -0.23
LINC00628-201ENST00000628516 ECDO95905 644 aaPredicted RBP13.59□□□□□ -0.23
LINC00628-201ENST00000628516 PSMA6P60900 246 aaKnown RBP13.59□□□□□ -0.23
LINC00628-201ENST00000628516 ARF6P62330 175 aa13.59□□□□□ -0.23
LINC00628-201ENST00000628516 ZNF85Q03923 595 aa13.59□□□□□ -0.23
LINC00628-201ENST00000628516 EGR3Q06889 387 aa13.59□□□□□ -0.23
LINC00628-201ENST00000628516 PLEKHG7Q6ZR37 379 aa13.59□□□□□ -0.23
LINC00628-201ENST00000628516 THAP5Q7Z6K1 395 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms