RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CLINT1Q14677 625 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 TSC22D1Q15714 1073 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 TFDP3Q5H9I0 405 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 TEX30Q5JUR7 227 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 METTL21CQ5VZV1 264 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 ANKRD26P1Q6NSI1 321 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 C3orf33Q6P1S2 294 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 FAHD1Q6P587 224 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 NPSR1Q6W5P4 371 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 ZFP2Q6ZN57 461 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 ZNF493Q6ZR52 646 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 PHF13Q86YI8 300 aaPredicted RBP2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 CALHM1Q8IU99 346 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 Q8N402 240 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 Q8N976 141 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 ZFP90Q8TF47 636 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 CA5BP1Q8WTZ4 195 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 PHF10Q8WUB8 498 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 AP3S1Q92572 193 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 ISOC2Q96AB3 205 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 CCDC126Q96EE4 140 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 RBBP8Q99708 897 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 ATP5SQ99766 215 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 NIPSNAP1Q9BPW8 284 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 UTP23Q9BRU9 249 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 UCK2Q9BZX2 261 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 CWH43Q9H720 699 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 OPN4Q9UHM6 478 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 LSM7Q9UK45 103 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 PAIP2BQ9ULR5 123 aaKnown RBP2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 PSG11Q9UQ72 335 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 COL22A1Q8NFW1 1626 aaPredicted RBP2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 PTPRGP23470 1445 aa2.67□□□□□ -1.98
SMCHD1-213ENST00000609587 CARMIL3Q8ND23 1372 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 A0A1W2PQ67 120 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 ZNF729A6NN14 1252 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 CENPXA8MT69 81 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 C9J4A7 227 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 CDC7O00311 574 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 ANGPTL7O43827 346 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 EIF4E2O60573 245 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 SLC19A2O60779 497 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 CTNSO60931 367 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 RCBTB2O95199 551 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 PLEKHA8P1O95397 391 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 AIFM1O95831 613 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 CRHP06850 196 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 NBEAP1P0C6P0 100 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 THRAP10827 490 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 SERPINB1P30740 379 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 HRH1P35367 487 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 CD79BP40259 229 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 MAGEA3P43357 314 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 RPS9P46781 194 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 GABRA4P48169 554 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 IDH2P48735 452 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 DNASE1L1P49184 302 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 SSR4P51571 173 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 RAP1GDS1P52306 607 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 RANP62826 216 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 MAD2L1BPQ15013 274 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 PON3Q15166 354 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 PTGES3Q15185 160 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 TAF1AQ15573 450 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 RBM48Q5RL73 367 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 IDNKQ5T6J7 187 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 DRAM2Q6UX65 266 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 OAFQ86UD1 273 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 RIMKLAQ8IXN7 391 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 PRSS58Q8IYP2 241 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 SAXO1Q8IYX7 474 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 PGAM4Q8N0Y7 254 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 TMEM251Q8N6I4 163 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 LRRC52Q8N7C0 313 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 CCDC112Q8NEF3 446 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 OR10R2Q8NGX6 335 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 SYNPRQ8TBG9 265 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 C22orf15Q8WYQ4 148 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 FAM3DQ96BQ1 224 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 STARD4Q96DR4 205 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 RMND5BQ96G75 393 aaPredicted RBP2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 BMFQ96LC9 184 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 TIMM29Q9BSF4 260 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 LINC00597Q9H2U6 94 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 PATZ1Q9HBE1 687 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 LHX9Q9NQ69 397 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 UVRAGQ9P2Y5 699 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 OR12D3Q9UGF7 316 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 ING4Q9UNL4 249 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 OR51B4Q9Y5P0 310 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 SAR1BQ9Y6B6 198 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 MTCH2Q9Y6C9 303 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 V9GYY9 64 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 SCN2AQ99250 2005 aa2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 MTCL1Q9Y4B5 1905 aaKnown RBP2.66□□□□□ -1.98
SMCHD1-213ENST00000609587 WDR62O43379 1518 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 M0R036 132 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 MRPS12O15235 138 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 SLC16A4O15374 487 aa2.65□□□□□ -1.99
SMCHD1-213ENST00000609587 MPZL1O95297 269 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms