RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 DAPL1A0PJW8 107 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 A6NIN4 97 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 DUX4L2P0CJ85 424 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 DUX4L3P0CJ86 424 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 DUX4L4P0CJ87 422 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 DUX4L5P0CJ88 424 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 DUX4L6P0CJ89 424 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 DUX4L7P0CJ90 424 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 HNF1AP20823 631 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 PCMT1P22061 227 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 CPT2P23786 658 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 GPM6AP51674 278 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 RAB40BQ12829 278 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 ODF4Q2M2E3 257 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 CEACAM21Q3KPI0 293 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 WDR25Q64LD2 544 aaPredicted RBP13.12□□□□□ -0.31
RPS28-203ENST00000600659 FAHD2BQ6P2I3 314 aaPredicted RBP13.12□□□□□ -0.31
RPS28-203ENST00000600659 DUX4L9Q6RFH8 374 aaPredicted RBP13.12□□□□□ -0.31
RPS28-203ENST00000600659 DOK3Q7L591 496 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 BOLLQ8N9W6 283 aaKnown RBP13.12□□□□□ -0.31
RPS28-203ENST00000600659 ZNF555Q8NEP9 628 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 OR4M2Q8NGB6 313 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 FAHD2AQ96GK7 314 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 RNF170Q96K19 258 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 Q96MT0 163 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 SSBP3Q9BWW4 388 aaPredicted RBP13.12□□□□□ -0.31
RPS28-203ENST00000600659 SMURF1Q9HCE7 757 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 FRRS1LQ9P0K9 344 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 DUX4Q9UBX2 424 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 ENPP5Q9UJA9 477 aa13.12□□□□□ -0.31
RPS28-203ENST00000600659 LOC105371242A0A075B767 164 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 IGHV3OR15-7A0A075B7D8 119 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 LOC107986453A0A1B0GWG9 222 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 ERICH4A6NGS2 130 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 SNTNA6NMZ2 147 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 ZNF732B4DXR9 585 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 H3BSH0 61 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 J3QLI3 93 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 RHBDL1O75783 438 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 GYPAP02724 150 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 GNAO1P09471 354 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 LIMS3P0CW19 117 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 LIMS4P0CW20 117 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 GATA3P23771 443 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 PITPNBP48739 271 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 GALEQ14376 348 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 ESCO2Q56NI9 601 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 DCAF12L2Q5VW00 463 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 FAM220AQ7Z4H9 259 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 LHFPL3Q86UP9 236 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 RDH10Q8IZV5 341 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 OR5A2Q8NGI9 324 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 OR10Z1Q8NGY1 313 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 NRG4Q8WWG1 115 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 C4orf36Q96KX1 117 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 ADI1Q9BV57 179 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 ALG8Q9BVK2 526 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 JAM3Q9BX67 310 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 WDR13Q9H1Z4 485 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 DCLRE1BQ9H816 532 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 ISG20L2Q9H9L3 353 aaKnown RBP13.11□□□□□ -0.31
RPS28-203ENST00000600659 FGF20Q9NP95 211 aaPredicted RBP13.11□□□□□ -0.31
RPS28-203ENST00000600659 GPR173Q9NS66 373 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 ERVK13-1Q9NX77 482 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 PCDHGB1Q9Y5G3 927 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 INSIG2Q9Y5U4 225 aa13.11□□□□□ -0.31
RPS28-203ENST00000600659 TRAV38-1A0A0B4J264 116 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 OR5B21A6NL26 309 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 OR4C45A6NMZ5 311 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 C22orf46C9J442 243 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 MTRF1O75570 445 aaKnown RBP13.1□□□□□ -0.31
RPS28-203ENST00000600659 NRASP01111 189 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 ADRA2CP18825 462 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 GNG3P63215 75 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 CLVS2Q5SYC1 327 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 TTC23Q5W5X9 447 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 PLCXD3Q63HM9 321 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 MOB3CQ70IA8 216 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 C1QL2Q7Z5L3 287 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 KCTD20Q7Z5Y7 419 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 THAP5Q7Z6K1 395 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 SYS1Q8N2H4 156 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 FGFRL1Q8N441 504 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 DHRSXQ8N5I4 330 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 OR8B3Q8NGG8 313 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 OR10AC1Q8NH08 325 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 FBLIM1Q8WUP2 373 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 CYGBQ8WWM9 190 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 OR8B2Q96RD0 313 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 INPP5EQ9NRR6 644 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 KAAG1Q9UBP8 84 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 RPL36Q9Y3U8 105 aaKnown RBP13.1□□□□□ -0.31
RPS28-203ENST00000600659 COL6A5A8TX70 2615 aa13.1□□□□□ -0.31
RPS28-203ENST00000600659 IGHV2-70DA0A0C4DH43 119 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 A0A1B0GVI7 797 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 PQLC2LA1A4F0 135 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 E9PI62 339 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 J3QLW9 94 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 SYT7O43581 403 aa13.09□□□□□ -0.31
RPS28-203ENST00000600659 FADS2O95864 444 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms