RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 C4orf36Q96KX1 117 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 OR8B2Q96RD0 313 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 ALG8Q9BVK2 526 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 SSBP3Q9BWW4 388 aaPredicted RBP11.58□□□□□ -0.56
UPF1-205ENST00000598209 MRPS18AQ9NVS2 196 aaKnown RBP11.58□□□□□ -0.56
UPF1-205ENST00000598209 NKX1-2Q9UD57 310 aaPredicted RBP11.58□□□□□ -0.56
UPF1-205ENST00000598209 POLR3KQ9Y2Y1 108 aaPredicted RBP11.58□□□□□ -0.56
UPF1-205ENST00000598209 A6NIN4 97 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 DHRS7CA6NNS2 312 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 KIAA1324LA8MWY0 1029 aaPredicted RBP11.57□□□□□ -0.56
UPF1-205ENST00000598209 ZNF732B4DXR9 585 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 J3QLW9 94 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 SYT7O43581 403 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 NRASP01111 189 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 IFNA2P01563 188 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 IGHA1P01876 353 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 ZNF19P17023 458 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 SRP14P37108 136 aaKnown RBP11.57□□□□□ -0.56
UPF1-205ENST00000598209 ACTA2P62736 377 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 GNB2P62879 340 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 GNG3P63215 75 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 ACTG2P63267 376 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 KLHL22Q53GT1 634 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 FAM76BQ5HYJ3 339 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 CLVS2Q5SYC1 327 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 SCCPDHQ8NBX0 429 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 SETD9Q8NE22 299 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 OR5A2Q8NGI9 324 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 OR52I1Q8NGK6 324 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 OR2G2Q8NGZ5 317 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 MYCBPQ99417 103 aaPredicted RBP11.57□□□□□ -0.56
UPF1-205ENST00000598209 ADI1Q9BV57 179 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 TMPRSS13Q9BYE2 586 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 VCXQ9H320 206 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 TRIM36Q9NQ86 728 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 INPP5EQ9NRR6 644 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 ERVK13-1Q9NX77 482 aa11.57□□□□□ -0.56
UPF1-205ENST00000598209 IGHV3OR15-7A0A075B7D8 119 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 PPIAL4CA0A0B4J2A2 164 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 LOC107986453A0A1B0GWG9 222 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 OR5B21A6NL26 309 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 SRRM5B3KS81 715 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 TRAPPC2LH3BP13 241 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 J3QLI3 93 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 AVPP01185 164 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 GYPAP02724 150 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 HTR1AP08908 422 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 UBCP0CG48 685 aaKnown RBP11.56□□□□□ -0.56
UPF1-205ENST00000598209 GATA3P23771 443 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 CFHR2P36980 270 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 CAPGP40121 348 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 PITPNBP48739 271 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 NANOS3P60323 173 aaKnown RBP11.56□□□□□ -0.56
UPF1-205ENST00000598209 SLC34A1Q06495 639 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 IL18R1Q13478 541 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 TEX36Q5VZQ5 186 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 TMEM42Q69YG0 159 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 FDX2Q6P4F2 183 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 FAM90A1Q86YD7 464 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 RDH10Q8IZV5 341 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 CCDC54Q8NEL0 328 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 OR10Z1Q8NGY1 313 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 PELI1Q96FA3 418 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 ZNF649Q9BS31 505 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 OR51I2Q9H344 312 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 PLEKHA1Q9HB21 404 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 MMP26Q9NRE1 261 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 GPR173Q9NS66 373 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 FRRS1LQ9P0K9 344 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 OR5V1Q9UGF6 321 aa11.56□□□□□ -0.56
UPF1-205ENST00000598209 H0YAE9 185 aa11.55□□□□□ -0.56
UPF1-205ENST00000598209 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.55□□□□□ -0.56
UPF1-205ENST00000598209 TNFRSF13BO14836 293 aaPredicted RBP11.55□□□□□ -0.56
UPF1-205ENST00000598209 ADAM20O43506 726 aa11.55□□□□□ -0.56
UPF1-205ENST00000598209 NDUFA2O43678 99 aa11.55□□□□□ -0.56
UPF1-205ENST00000598209 MUC1P15941 1255 aaPredicted RBP11.55□□□□□ -0.56
UPF1-205ENST00000598209 ZNF12P17014 697 aa11.55□□□□□ -0.56
UPF1-205ENST00000598209 MICBQ29980 383 aa11.55□□□□□ -0.56
UPF1-205ENST00000598209 TMEM244Q5VVB8 128 aa11.55□□□□□ -0.56
UPF1-205ENST00000598209 WDR25Q64LD2 544 aaPredicted RBP11.55□□□□□ -0.56
UPF1-205ENST00000598209 ZNF841Q6ZN19 808 aa11.55□□□□□ -0.56
UPF1-205ENST00000598209 C1orf229Q6ZS94 237 aaPredicted RBP11.55□□□□□ -0.56
UPF1-205ENST00000598209 C8orf59Q8N0T1 100 aaPredicted RBP11.55□□□□□ -0.56
UPF1-205ENST00000598209 SYS1Q8N2H4 156 aa11.55□□□□□ -0.56
UPF1-205ENST00000598209 SEH1LQ96EE3 360 aa11.55□□□□□ -0.56
UPF1-205ENST00000598209 C7orf69Q9H7B7 122 aa11.55□□□□□ -0.56
UPF1-205ENST00000598209 ISG20L2Q9H9L3 353 aaKnown RBP11.55□□□□□ -0.56
UPF1-205ENST00000598209 FGF20Q9NP95 211 aaPredicted RBP11.55□□□□□ -0.56
UPF1-205ENST00000598209 CTSZQ9UBR2 303 aa11.55□□□□□ -0.56
UPF1-205ENST00000598209 CLN8Q9UBY8 286 aa11.55□□□□□ -0.56
UPF1-205ENST00000598209 HSPE1-MOB4S4R3N1 261 aa11.55□□□□□ -0.56
UPF1-205ENST00000598209 SVEP1Q4LDE5 3571 aa11.55□□□□□ -0.56
UPF1-205ENST00000598209 LOC105371242A0A075B767 164 aa11.54□□□□□ -0.56
UPF1-205ENST00000598209 ANKRD61A6NGH8 418 aa11.54□□□□□ -0.56
UPF1-205ENST00000598209 AKR7A2O43488 359 aa11.54□□□□□ -0.56
UPF1-205ENST00000598209 RHBDL1O75783 438 aa11.54□□□□□ -0.56
UPF1-205ENST00000598209 GNAO1P09471 354 aa11.54□□□□□ -0.56
UPF1-205ENST00000598209 CCR9P51686 369 aa11.54□□□□□ -0.56
UPF1-205ENST00000598209 GMFBP60983 142 aa11.54□□□□□ -0.56
UPF1-205ENST00000598209 ALKBH1Q13686 389 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms