RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 KCTD8Q6ZWB6 473 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 ZDHHC13Q8IUH4 622 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 PNLDC1Q8NA58 520 aaKnown RBP10.77□□□□□ -0.69
LIG1-212ENST00000596549 OR5T2Q8NGG2 359 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 FAM81AQ8TBF8 368 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 OR51E1Q8TCB6 317 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 ASB17Q8WXJ9 295 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 RNF170Q96K19 258 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 GAFA1Q96PS6 74 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 RAB3IPQ96QF0 476 aaPredicted RBP10.77□□□□□ -0.69
LIG1-212ENST00000596549 IL4I1Q96RQ9 567 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 GABARAPL3Q9BY60 117 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 SEMA6AQ9H2E6 1030 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 MRM2Q9UI43 246 aaKnown RBP10.77□□□□□ -0.69
LIG1-212ENST00000596549 IKZF2Q9UKS7 526 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 OAZ3Q9UMX2 235 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 TMEM14AQ9Y6G1 99 aa10.77□□□□□ -0.69
LIG1-212ENST00000596549 ACOD1A6NK06 481 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 DHRS3O75911 302 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 ATP5HO75947 161 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 LIPFP07098 398 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 FCGR1AP12314 374 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 MAP2K3P46734 347 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 TGM4P49221 684 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 ARF6P62330 175 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 IKZF1Q13422 519 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 DGUOKQ16854 277 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 METTL11BQ5VVY1 283 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 ZNF322Q6U7Q0 402 aaPredicted RBP10.76□□□□□ -0.69
LIG1-212ENST00000596549 ZNF788Q6ZQV5 615 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 ASRGL1Q7L266 308 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 COMMD2Q86X83 199 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 GID4Q8IVV7 300 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 C3orf56Q8N813 242 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 LY6G5BQ8NDX9 201 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 OR51G2Q8NGK0 314 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 APOL4Q9BPW4 351 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 OR51I2Q9H344 312 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 MOB1AQ9H8S9 216 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 CLN6Q9NWW5 311 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 HAO2Q9NYQ3 351 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 ZNF222Q9UK12 451 aa10.76□□□□□ -0.69
LIG1-212ENST00000596549 DSCAML1Q8TD84 2053 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 A0A1B0GTI1 187 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 SAC3D1A6NKF1 404 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 ZNF732B4DXR9 585 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 LOC110117498-PIK3R3F6TDL0 507 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 APOL3O95236 402 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 ECDO95905 644 aaPredicted RBP10.75□□□□□ -0.69
LIG1-212ENST00000596549 ATP6V1B1P15313 513 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 DLX1P56177 255 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 GNG3P63215 75 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 PRB3Q04118 309 aaPredicted RBP10.75□□□□□ -0.69
LIG1-212ENST00000596549 FOXL1Q12952 345 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 C11orf91Q3C1V1 193 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 CEACAM21Q3KPI0 293 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 ATPAF1Q5TC12 328 aaPredicted RBP10.75□□□□□ -0.69
LIG1-212ENST00000596549 Q6ZSR3 168 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 SLC36A1Q7Z2H8 476 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 VMO1Q7Z5L0 202 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 ANGPTL6Q8NI99 470 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 C8orf46Q8TAG6 207 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 LHX4Q969G2 390 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 SLC25A28Q96A46 364 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 MNTQ99583 582 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 TBX5Q99593 518 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 DCTN5Q9BTE1 182 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 OSBPL10Q9BXB5 764 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 DNTTIP1Q9H147 329 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 ELL3Q9HB65 397 aaPredicted RBP10.75□□□□□ -0.69
LIG1-212ENST00000596549 NLKQ9UBE8 527 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 DNAJB11Q9UBS4 358 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 PIGLQ9Y2B2 252 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 PCDHGB1Q9Y5G3 927 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 R4GMQ9 66 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 V9GYS6 101 aa10.75□□□□□ -0.69
LIG1-212ENST00000596549 IGKV1D-17A0A075B6S4 117 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 IGHV1-69DA0A0B4J2H0 117 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 NKX6-3A6NJ46 265 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 OR5B21A6NL26 309 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 ZNF670-ZNF695F2Z2N8 137 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 SIGLEC5O15389 551 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 NDUFB3O43676 98 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 IGHV1-69P01742 117 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 MELTFP08582 738 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 GLRA1P23415 457 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 BPIFB3P59826 476 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 EGR3Q06889 387 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 PDCD1Q15116 288 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 CDONQ4KMG0 1287 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 ZBTB37Q5TC79 503 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 PLCXD3Q63HM9 321 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 TMEM42Q69YG0 159 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 Q6YL49 198 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 PDZD9Q8IXQ8 264 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 ELMOD2Q8IZ81 293 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 Q8N7P7 452 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 OR14K1Q8NGZ2 314 aa10.74□□□□□ -0.69
LIG1-212ENST00000596549 PYDC1Q8WXC3 89 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms