RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 SSBP1Q04837 148 aaKnown RBP13.44□□□□□ -0.26
CIRBP-228ENST00000590347 RUNX2Q13950 521 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 PDGFRLQ15198 375 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 KIAA2026Q5HYC2 2103 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 C9orf50Q5SZB4 431 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 OR2AJ1Q8NGZ0 328 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 OR13G1Q8NGZ3 307 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 OR4X1Q8NH49 305 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 HAS2Q92819 552 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 NOL4LQ96MY1 436 aaPredicted RBP13.44□□□□□ -0.26
CIRBP-228ENST00000590347 CENPMQ9NSP4 180 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 MRPS2Q9Y399 296 aaKnown RBP13.44□□□□□ -0.26
CIRBP-228ENST00000590347 ZNF705FA8MVS1 300 aaPredicted RBP13.44□□□□□ -0.26
CIRBP-228ENST00000590347 SIAH2O43255 324 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 ZNF705DP0CH99 300 aaPredicted RBP13.44□□□□□ -0.26
CIRBP-228ENST00000590347 ZNF705BP0CI00 300 aaPredicted RBP13.44□□□□□ -0.26
CIRBP-228ENST00000590347 OR3A1P47881 315 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 CDK3Q00526 305 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 HNF4GQ14541 408 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 ZNF77Q15935 545 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 TDRG1Q3Y452 100 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 OR2L3Q8NG85 312 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 FOXQ1Q9C009 403 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 EHFQ9NZC4 300 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 LRIT1Q9P2V4 623 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 LOC107986453A0A1B0GWG9 222 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 VSIG8P0DPA2 414 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 PAX1P15863 534 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 AMY2BP19961 511 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 PTGER4P35408 488 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 OR3A2P47893 321 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 EMP2P54851 167 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 ERVS71-1P61550 626 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 RAB11AP62491 216 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 TRA2BP62995 288 aaKnown RBP13.43□□□□□ -0.26
CIRBP-228ENST00000590347 RUNX1Q01196 453 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 TMEM176BQ3YBM2 270 aaPredicted RBP13.43□□□□□ -0.26
CIRBP-228ENST00000590347 C1orf189Q5VU69 101 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 LYPD6BQ8NI32 183 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 SLCO5A1Q9H2Y9 848 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 STARD5Q9NSY2 213 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 NUP210LQ5VU65 1888 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 A0A087WUJ7 227 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 PET100P0DJ07 73 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 GRK6P43250 576 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 OR4C3Q8NH37 302 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 ZNF524Q96C55 264 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 NIPSNAP3BQ9BS92 247 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 SUSD2Q9UGT4 822 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 SRPK3Q9UPE1 567 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 WSB1Q9Y6I7 421 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 SEC16AO15027 2179 aa13.43□□□□□ -0.26
CIRBP-228ENST00000590347 SLC17A1Q14916 467 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 TMEM35AQ53FP2 167 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 FNDC9Q8TBE3 224 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 TSPAN32Q96QS1 320 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 TRIM2Q9C040 744 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 B3GALT1Q9Y5Z6 326 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 SPINT1O43278 529 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 ADH5P11766 374 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 RBMXP38159 391 aaKnown RBP13.42□□□□□ -0.26
CIRBP-228ENST00000590347 CLDN17P56750 224 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 FAM3AP98173 230 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 RPL18Q07020 188 aaKnown RBP13.42□□□□□ -0.26
CIRBP-228ENST00000590347 ZNF774Q6NX45 483 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 OPN5Q6U736 354 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 TOMM40LQ969M1 308 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 HIST1H2AAQ96QV6 131 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 ADAM19Q9H013 955 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 ASCL3Q9NQ33 180 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 SHANK1Q9Y566 2161 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 TAAR5O14804 337 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 SLC16A7O60669 478 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 ZNF217O75362 1048 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 RPLP1P05386 114 aaKnown RBP13.42□□□□□ -0.26
CIRBP-228ENST00000590347 TSPAN7P41732 249 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 C1orf87Q8N0U7 546 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 OR52R1Q8NGF1 315 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 OR5H2Q8NGV7 314 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 OR2G3Q8NGZ4 309 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 SYT3Q9BQG1 590 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 CABLES2Q9BTV7 478 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 GPR173Q9NS66 373 aa13.42□□□□□ -0.26
CIRBP-228ENST00000590347 MRPS18CQ9Y3D5 142 aaKnown RBP13.42□□□□□ -0.26
CIRBP-228ENST00000590347 MYO7BQ6PIF6 2116 aa13.41□□□□□ -0.26
CIRBP-228ENST00000590347 GALR2O43603 387 aaPredicted RBP13.41□□□□□ -0.26
CIRBP-228ENST00000590347 DFFBO76075 338 aa13.41□□□□□ -0.26
CIRBP-228ENST00000590347 WISP1O95388 367 aa13.41□□□□□ -0.26
CIRBP-228ENST00000590347 SRP19P09132 144 aaKnown RBP13.41□□□□□ -0.26
CIRBP-228ENST00000590347 RAB4AP20338 218 aa13.41□□□□□ -0.26
CIRBP-228ENST00000590347 S1PR1P21453 382 aa13.41□□□□□ -0.26
CIRBP-228ENST00000590347 CSNK2A1P68400 391 aaPredicted RBP13.41□□□□□ -0.26
CIRBP-228ENST00000590347 PLAC9Q5JTB6 97 aa13.41□□□□□ -0.26
CIRBP-228ENST00000590347 TMEM217Q8N7C4 229 aa13.41□□□□□ -0.26
CIRBP-228ENST00000590347 CSNK2A3Q8NEV1 391 aa13.41□□□□□ -0.26
CIRBP-228ENST00000590347 SPACA7Q96KW9 195 aa13.41□□□□□ -0.26
CIRBP-228ENST00000590347 VN1R1Q9GZP7 353 aa13.41□□□□□ -0.26
CIRBP-228ENST00000590347 TMED3Q9Y3Q3 217 aa13.41□□□□□ -0.26
CIRBP-228ENST00000590347 A0A0A6YYD4 124 aa13.41□□□□□ -0.26
CIRBP-228ENST00000590347 ZFP92A6NM28 416 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms