RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 A0A1B0GW55 424 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 TMEM210A6NLX4 147 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 RHBDL1O75783 438 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 GYPAP02724 150 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 DUX4L2P0CJ85 424 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 DUX4L3P0CJ86 424 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 DUX4L4P0CJ87 422 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 DUX4L5P0CJ88 424 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 DUX4L6P0CJ89 424 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 DUX4L7P0CJ90 424 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 CFHR2P36980 270 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 SRP14P37108 136 aaKnown RBP16.76■□□□□ 0.27
SS18-218ENST00000581021 PITPNBP48739 271 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 SRSF2Q01130 221 aaKnown RBP16.76■□□□□ 0.27
SS18-218ENST00000581021 CEACAM21Q3KPI0 293 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 TEX36Q5VZQ5 186 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 DUX4L9Q6RFH8 374 aaPredicted RBP16.76■□□□□ 0.27
SS18-218ENST00000581021 RDH10Q8IZV5 341 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 ZNF555Q8NEP9 628 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 OR52I1Q8NGK6 324 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 OR2G2Q8NGZ5 317 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 CYGBQ8WWM9 190 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 PELI1Q96FA3 418 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 MDFIQ99750 246 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 WDR13Q9H1Z4 485 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 OR51I2Q9H344 312 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 SMURF1Q9HCE7 757 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 ABCB9Q9NP78 766 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 GPR173Q9NS66 373 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 DUX4Q9UBX2 424 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 ENPP5Q9UJA9 477 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 COL6A5A8TX70 2615 aa16.76■□□□□ 0.27
SS18-218ENST00000581021 SRRM5B3KS81 715 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 ZNF732B4DXR9 585 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 C22orf46C9J442 243 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 J3QLI3 93 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 FSHBP01225 129 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 GNAO1P09471 354 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 ZNF12P17014 697 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 GMFBP60983 142 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 PLCXD3Q63HM9 321 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 KCTD8Q6ZWB6 473 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 MOB3CQ70IA8 216 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 DOK3Q7L591 496 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 FAM220AQ7Z4H9 259 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 THAP5Q7Z6K1 395 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 LHFPL3Q86UP9 236 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 FGFRL1Q8N441 504 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 OR8B3Q8NGG8 313 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 C4orf36Q96KX1 117 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 Q96MT0 163 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 OR8B2Q96RD0 313 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 ISG20L2Q9H9L3 353 aaKnown RBP16.75■□□□□ 0.27
SS18-218ENST00000581021 MRPS18AQ9NVS2 196 aaKnown RBP16.75■□□□□ 0.27
SS18-218ENST00000581021 FRRS1LQ9P0K9 344 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 INSIG2Q9Y5U4 225 aa16.75■□□□□ 0.27
SS18-218ENST00000581021 LOC107986453A0A1B0GWG9 222 aa16.74■□□□□ 0.27
SS18-218ENST00000581021 SNTNA6NMZ2 147 aa16.74■□□□□ 0.27
SS18-218ENST00000581021 MTRF1O75570 445 aaKnown RBP16.74■□□□□ 0.27
SS18-218ENST00000581021 NRASP01111 189 aa16.74■□□□□ 0.27
SS18-218ENST00000581021 TFF1P04155 84 aa16.74■□□□□ 0.27
SS18-218ENST00000581021 AMY2BP19961 511 aa16.74■□□□□ 0.27
SS18-218ENST00000581021 GNB2P62879 340 aa16.74■□□□□ 0.27
SS18-218ENST00000581021 GNG3P63215 75 aa16.74■□□□□ 0.27
SS18-218ENST00000581021 WDR25Q64LD2 544 aaPredicted RBP16.74■□□□□ 0.27
SS18-218ENST00000581021 FDX2Q6P4F2 183 aa16.74■□□□□ 0.27
SS18-218ENST00000581021 ITFG2Q969R8 447 aa16.74■□□□□ 0.27
SS18-218ENST00000581021 ALG8Q9BVK2 526 aa16.74■□□□□ 0.27
SS18-218ENST00000581021 C7orf69Q9H7B7 122 aa16.74■□□□□ 0.27
SS18-218ENST00000581021 C8orf4Q9NR00 106 aa16.74■□□□□ 0.27
SS18-218ENST00000581021 ERVK13-1Q9NX77 482 aa16.74■□□□□ 0.27
SS18-218ENST00000581021 TRAV38-1A0A0B4J264 116 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 DHRS7CA6NNS2 312 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 E9PI62 339 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 J3QLW9 94 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 AKR7A2O43488 359 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 ADAM20O43506 726 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 SYT7O43581 403 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 ZNF19P17023 458 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 GATA3P23771 443 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 CPT2P23786 658 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 RAB40BQ12829 278 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 GALEQ14376 348 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 CLVS2Q5SYC1 327 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 LAIR2Q6ISS4 152 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 NLRC3Q7RTR2 1065 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 C1QL2Q7Z5L3 287 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 OR5A2Q8NGI9 324 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 OR10Z1Q8NGY1 313 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 OR10AC1Q8NH08 325 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 NRG4Q8WWG1 115 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 ADI1Q9BV57 179 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 RASSF4Q9H2L5 321 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 CLN8Q9UBY8 286 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 OR5V1Q9UGF6 321 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 PCDHGB1Q9Y5G3 927 aa16.73■□□□□ 0.27
SS18-218ENST00000581021 IGHV2-70DA0A0C4DH43 119 aa16.72■□□□□ 0.27
SS18-218ENST00000581021 A0A1B0GVI7 797 aa16.72■□□□□ 0.27
SS18-218ENST00000581021 PQLC2LA1A4F0 135 aa16.72■□□□□ 0.27
SS18-218ENST00000581021 OR5B21A6NL26 309 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms