RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 A0A0B4J2A0 478 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 A0A0J9YW62 118 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 DBX1A6NMT0 343 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 A8MXK9 166 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 D6RAR5 112 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 GLI4P10075 376 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 MGMTP16455 207 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 PTGFRP43088 359 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 RAB13P51153 203 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 CSNK2A1P68400 391 aaPredicted RBP9.2□□□□□ -0.94
TOP3A-209ENST00000580095 SLC35A1P78382 337 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 DEFA5Q01523 94 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 ENDOGQ14249 297 aaKnown RBP9.2□□□□□ -0.94
TOP3A-209ENST00000580095 HIST3H3Q16695 136 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 CRIP3Q6Q6R5 217 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 OR2W3Q7Z3T1 314 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 HOGA1Q86XE5 327 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 KCNRGQ8N5I3 272 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 CSNK2A3Q8NEV1 391 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 THAP6Q8TBB0 222 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 DCUN1D4Q92564 292 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 DYRK2Q92630 601 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 FBXO17Q96EF6 278 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 MRPS24Q96EL2 167 aaKnown RBP9.2□□□□□ -0.94
TOP3A-209ENST00000580095 SRXN1Q9BYN0 137 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 ACKR4Q9NPB9 350 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 GPR173Q9NS66 373 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 SLC2A8Q9NY64 477 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 SHPKQ9UHJ6 478 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 FAM221AA4D161 298 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 MSGN1A6NI15 193 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 SGCEO43556 437 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 SPRY1O43609 319 aaPredicted RBP9.19□□□□□ -0.94
TOP3A-209ENST00000580095 CD63P08962 238 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 FGF2P09038 288 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 COX6A1P12074 109 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 MSR1P21757 451 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 SNU13P55769 128 aaKnown RBP9.19□□□□□ -0.94
TOP3A-209ENST00000580095 ANKRD55Q3KP44 614 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 OR13G1Q8NGZ3 307 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 ALKBH3Q96Q83 286 aaPredicted RBP9.19□□□□□ -0.94
TOP3A-209ENST00000580095 OR10A2Q9H208 303 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 CHMP1AQ9HD42 196 aaPredicted RBP9.19□□□□□ -0.94
TOP3A-209ENST00000580095 EHFQ9NZC4 300 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 ADAMTS9Q9P2N4 1935 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 NBEAQ8NFP9 2946 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 H0YIZ8 118 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 ABCD4O14678 606 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 TLX3O43711 291 aaPredicted RBP9.19□□□□□ -0.94
TOP3A-209ENST00000580095 HPNP05981 417 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 KLK3P07288 261 aaPredicted RBP9.19□□□□□ -0.94
TOP3A-209ENST00000580095 HOXB5P09067 269 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 SPINK2P20155 84 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 AGTR1P30556 359 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 RFC3P40938 356 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 OR3A2P47893 321 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 CLEC18BQ6UXF7 455 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 DOK3Q7L591 496 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 INO80EQ8NBZ0 244 aaPredicted RBP9.19□□□□□ -0.94
TOP3A-209ENST00000580095 TMEM185AQ8NFB2 350 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 OR5H2Q8NGV7 314 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 OR51F2Q8NH61 342 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 PILRBQ9UKJ0 227 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 HDGFL3Q9Y3E1 203 aa9.19□□□□□ -0.94
TOP3A-209ENST00000580095 FAM230AA0A1W2PPH8 454 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 DNASE2O00115 360 aaPredicted RBP9.18□□□□□ -0.94
TOP3A-209ENST00000580095 DUS4LO95620 317 aaKnown RBP9.18□□□□□ -0.94
TOP3A-209ENST00000580095 IL2RAP01589 272 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 RFPL3SP0C7P2 107 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 LIFP15018 202 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 ACKR3P25106 362 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 CALCRP30988 508 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 PCP4P48539 62 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 RRADP55042 308 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 H3F3AP84243 136 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 HGFACQ04756 655 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 FGL1Q08830 312 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 SSPNQ14714 243 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 ACOT7LQ6ZUV0 252 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 GTPBP8Q8N3Z3 284 aaPredicted RBP9.18□□□□□ -0.94
TOP3A-209ENST00000580095 ZIC4Q8N9L1 334 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 PNLDC1Q8NA58 520 aaKnown RBP9.18□□□□□ -0.94
TOP3A-209ENST00000580095 OR9K2Q8NGE7 335 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 AKR7LQ8NHP1 331 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 ULBP2Q9BZM5 246 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 WNT5BQ9H1J7 359 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 ASF1BQ9NVP2 202 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 RASL12Q9NYN1 266 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 A0A0D9SG52 128 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 TUBAL3A6NHL2 446 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 M0R135 149 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 MFNGO00587 321 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 BCL2L11O43521 198 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 B4GALT1P15291 398 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 OTX2P32243 289 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 SUPT4H1P63272 117 aaKnown RBP9.18□□□□□ -0.94
TOP3A-209ENST00000580095 ZNF774Q6NX45 483 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 PGAP1Q75T13 922 aa9.18□□□□□ -0.94
TOP3A-209ENST00000580095 RPS19BP1Q86WX3 136 aaKnown RBP9.18□□□□□ -0.94
TOP3A-209ENST00000580095 ZDHHC22Q8N966 263 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms