RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 WDFY2Q96P53 400 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 CNN2Q99439 309 aaKnown RBP11.09□□□□□ -0.63
TRAF4-214ENST00000580073 TBX5Q99593 518 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 CHIAQ9BZP6 476 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 TNFRSF19Q9NS68 423 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 UFSP2Q9NUQ7 469 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 RNF114Q9Y508 228 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 IGHV1-69DA0A0B4J2H0 117 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 A0A1B0GVI7 797 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 hCG_1807616A0A1W2PRN6 198 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 ZNF878C9JN71 531 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 H0YAE9 185 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 XRCC2O43543 280 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 PTBP3O95758 552 aaKnown RBP11.08□□□□□ -0.64
TRAF4-214ENST00000580073 IGHV1-69P01742 117 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 LYNP07948 512 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 IL5RAQ01344 420 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 GUCA2AQ02747 115 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 ZNF85Q03923 595 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 ZNF91Q05481 1191 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 SNCBQ16143 134 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 FAM201AQ5SY85 155 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 ZNF684Q5T5D7 378 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 PRAMEF6Q5VXH4 476 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 TTC23Q5W5X9 447 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 RUSC1-AS1Q66K80 236 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 DRAM2Q6UX65 266 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 LYPD2Q6UXB3 125 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 LDLRAD3Q86YD5 345 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 CMTM4Q8IZR5 234 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 ZNF454Q8N9F8 522 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 PPP1R14AQ96A00 147 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 RNF166Q96A37 237 aaPredicted RBP11.08□□□□□ -0.64
TRAF4-214ENST00000580073 RNFT2Q96EX2 444 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 DMRTB1Q96MA1 342 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 KCNJ15Q99712 375 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 APOL4Q9BPW4 351 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 ZNF649Q9BS31 505 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 COPS4Q9BT78 406 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 CLN6Q9NWW5 311 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 EXOGQ9Y2C4 368 aaKnown RBP11.08□□□□□ -0.64
TRAF4-214ENST00000580073 FAM96BQ9Y3D0 163 aa11.08□□□□□ -0.64
TRAF4-214ENST00000580073 CENPVL3A0A0U1RRI6 287 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 A0A1W2PQL4 384 aaPredicted RBP11.07□□□□□ -0.64
TRAF4-214ENST00000580073 CD300LBA8K4G0 201 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 C3orf80F5H4A9 247 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 H0YJX3 145 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 SRSF10O75494 262 aaKnown RBP11.07□□□□□ -0.64
TRAF4-214ENST00000580073 SFTPBP07988 381 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 DBTP11182 482 aaKnown RBP11.07□□□□□ -0.64
TRAF4-214ENST00000580073 MMP9P14780 707 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 CA6P23280 308 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 RBMXP38159 391 aaKnown RBP11.07□□□□□ -0.64
TRAF4-214ENST00000580073 PMELP40967 661 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 CXCR4P61073 352 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 ROM1Q03395 351 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 TMED1Q13445 227 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 C2orf68Q2NKX9 166 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 MEDAGQ5VYS4 303 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 DHRS7BQ6IAN0 325 aaPredicted RBP11.07□□□□□ -0.64
TRAF4-214ENST00000580073 FTMTQ8N4E7 242 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 BOLLQ8N9W6 283 aaKnown RBP11.07□□□□□ -0.64
TRAF4-214ENST00000580073 OR8S1Q8NH09 359 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 NPRL2Q8WTW4 380 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 OR8B4Q96RC9 309 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 SP140LQ9H930 580 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 MRM2Q9UI43 246 aaKnown RBP11.07□□□□□ -0.64
TRAF4-214ENST00000580073 LAMP5Q9UJQ1 280 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 MYRFQ9Y2G1 1151 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 LRP12Q9Y561 859 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 PCDHGB5Q9Y5G0 923 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 KPTNQ9Y664 436 aa11.07□□□□□ -0.64
TRAF4-214ENST00000580073 ANKRD30BLA7E2S9 258 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 GPR37O15354 613 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 GPR137BO60478 399 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 CLPXO76031 633 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 FBP1P09467 338 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 H2BFMP0C1H6 154 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 DDOSTP39656 456 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 SLC15A1P46059 708 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 CX3CR1P49238 355 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 ZNF121P58317 390 aaPredicted RBP11.06□□□□□ -0.64
TRAF4-214ENST00000580073 TAF13Q15543 124 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 MPPED2Q15777 294 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 TAF9Q16594 264 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 MICBQ29980 383 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 GLYATL3Q5SZD4 288 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 SFRP4Q6FHJ7 346 aaPredicted RBP11.06□□□□□ -0.64
TRAF4-214ENST00000580073 ZNF322Q6U7Q0 402 aaPredicted RBP11.06□□□□□ -0.64
TRAF4-214ENST00000580073 IZUMO2Q6UXV1 221 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 PLEKHG7Q6ZR37 379 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 SLC36A1Q7Z2H8 476 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 C19orf18Q8NEA5 215 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 OR2AE1Q8NHA4 323 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 LHX4Q969G2 390 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 RFKQ969G6 155 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 TBX15Q96SF7 602 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 SIRPDQ9H106 197 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 TCF7L1Q9HCS4 588 aa11.06□□□□□ -0.64
TRAF4-214ENST00000580073 MRPS18AQ9NVS2 196 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms