RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 CEP78Q5JTW2 689 aa19.61■□□□□ 0.73
SNF8-217ENST00000576353 CLVS2Q5SYC1 327 aa19.61■□□□□ 0.73
SNF8-217ENST00000576353 TTC23Q5W5X9 447 aa19.61■□□□□ 0.73
SNF8-217ENST00000576353 PLCXD3Q63HM9 321 aa19.61■□□□□ 0.73
SNF8-217ENST00000576353 SCCPDHQ8NBX0 429 aa19.61■□□□□ 0.73
SNF8-217ENST00000576353 CCDC54Q8NEL0 328 aa19.61■□□□□ 0.73
SNF8-217ENST00000576353 OR14K1Q8NGZ2 314 aa19.61■□□□□ 0.73
SNF8-217ENST00000576353 FGF23Q9GZV9 251 aaPredicted RBP19.61■□□□□ 0.73
SNF8-217ENST00000576353 ACOXLQ9NUZ1 547 aa19.61■□□□□ 0.73
SNF8-217ENST00000576353 ERVK-18Q9QC07 812 aa19.61■□□□□ 0.73
SNF8-217ENST00000576353 LOC105371242A0A075B767 164 aa19.6■□□□□ 0.73
SNF8-217ENST00000576353 ZNF732B4DXR9 585 aa19.6■□□□□ 0.73
SNF8-217ENST00000576353 TNFRSF13BO14836 293 aaPredicted RBP19.6■□□□□ 0.73
SNF8-217ENST00000576353 AVPP01185 164 aa19.6■□□□□ 0.73
SNF8-217ENST00000576353 EGR1P18146 543 aa19.6■□□□□ 0.73
SNF8-217ENST00000576353 PEX2P28328 305 aa19.6■□□□□ 0.73
SNF8-217ENST00000576353 ACTA2P62736 377 aa19.6■□□□□ 0.73
SNF8-217ENST00000576353 ACTG2P63267 376 aa19.6■□□□□ 0.73
SNF8-217ENST00000576353 ODF4Q2M2E3 257 aa19.6■□□□□ 0.73
SNF8-217ENST00000576353 C1orf229Q6ZS94 237 aaPredicted RBP19.6■□□□□ 0.73
SNF8-217ENST00000576353 FAM90A1Q86YD7 464 aa19.6■□□□□ 0.73
SNF8-217ENST00000576353 EGFL6Q8IUX8 553 aa19.6■□□□□ 0.73
SNF8-217ENST00000576353 NANPQ8TBE9 248 aa19.6■□□□□ 0.73
SNF8-217ENST00000576353 OR51I2Q9H344 312 aa19.6■□□□□ 0.73
SNF8-217ENST00000576353 AMBNQ9NP70 447 aa19.6■□□□□ 0.73
SNF8-217ENST00000576353 INSIG2Q9Y5U4 225 aa19.6■□□□□ 0.73
SNF8-217ENST00000576353 SRRM5B3KS81 715 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 ADAM20O43506 726 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 SYT7O43581 403 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 UBCP0CG48 685 aaKnown RBP19.59■□□□□ 0.73
SNF8-217ENST00000576353 OR12D2P58182 307 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 KLHL22Q53GT1 634 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 WDR38Q5JTN6 314 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 WDR25Q64LD2 544 aaPredicted RBP19.59■□□□□ 0.73
SNF8-217ENST00000576353 TMEM42Q69YG0 159 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 BTNL3Q6UXE8 466 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 ZNF841Q6ZN19 808 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 C1QL2Q7Z5L3 287 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 PRSS35Q8N3Z0 413 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 CYGBQ8WWM9 190 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 RAB40AQ8WXH6 277 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 C12orf43Q96C57 262 aaKnown RBP19.59■□□□□ 0.73
SNF8-217ENST00000576353 MRI1Q9BV20 369 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 DCLRE1BQ9H816 532 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 PLEKHA1Q9HB21 404 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 INPP5EQ9NRR6 644 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 MRPS18AQ9NVS2 196 aaKnown RBP19.59■□□□□ 0.73
SNF8-217ENST00000576353 OPN4Q9UHM6 478 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 AUP1Q9Y679 476 aa19.59■□□□□ 0.73
SNF8-217ENST00000576353 SVEP1Q4LDE5 3571 aa19.58■□□□□ 0.73
SNF8-217ENST00000576353 CASQ2O14958 399 aaPredicted RBP19.58■□□□□ 0.72
SNF8-217ENST00000576353 GYPAP02724 150 aa19.58■□□□□ 0.72
SNF8-217ENST00000576353 GALEQ14376 348 aa19.58■□□□□ 0.72
SNF8-217ENST00000576353 FDX2Q6P4F2 183 aa19.58■□□□□ 0.72
SNF8-217ENST00000576353 DHRSXQ8N5I4 330 aa19.58■□□□□ 0.72
SNF8-217ENST00000576353 OR2G2Q8NGZ5 317 aa19.58■□□□□ 0.72
SNF8-217ENST00000576353 ZNF671Q8TAW3 534 aa19.58■□□□□ 0.72
SNF8-217ENST00000576353 APH1BQ8WW43 257 aa19.58■□□□□ 0.72
SNF8-217ENST00000576353 KAAG1Q9UBP8 84 aa19.58■□□□□ 0.72
SNF8-217ENST00000576353 MYRFQ9Y2G1 1151 aa19.58■□□□□ 0.72
SNF8-217ENST00000576353 IGHV3OR15-7A0A075B7D8 119 aa19.57■□□□□ 0.72
SNF8-217ENST00000576353 J3QLW9 94 aa19.57■□□□□ 0.72
SNF8-217ENST00000576353 IGHA1P01876 353 aa19.57■□□□□ 0.72
SNF8-217ENST00000576353 ZNF19P17023 458 aa19.57■□□□□ 0.72
SNF8-217ENST00000576353 PAX2Q02962 417 aa19.57■□□□□ 0.72
SNF8-217ENST00000576353 OGFRL1Q5TC84 451 aaPredicted RBP19.57■□□□□ 0.72
SNF8-217ENST00000576353 ZNF691Q5VV52 312 aa19.57■□□□□ 0.72
SNF8-217ENST00000576353 CD276Q5ZPR3 534 aa19.57■□□□□ 0.72
SNF8-217ENST00000576353 LHFPL3Q86UP9 236 aa19.57■□□□□ 0.72
SNF8-217ENST00000576353 SYS1Q8N2H4 156 aa19.57■□□□□ 0.72
SNF8-217ENST00000576353 SETD9Q8NE22 299 aa19.57■□□□□ 0.72
SNF8-217ENST00000576353 C4orf36Q96KX1 117 aa19.57■□□□□ 0.72
SNF8-217ENST00000576353 TECTBQ96PL2 329 aa19.57■□□□□ 0.72
SNF8-217ENST00000576353 ALG8Q9BVK2 526 aa19.57■□□□□ 0.72
SNF8-217ENST00000576353 DNAJB11Q9UBS4 358 aa19.57■□□□□ 0.72
SNF8-217ENST00000576353 IGHV2-70DA0A0C4DH43 119 aa19.56■□□□□ 0.72
SNF8-217ENST00000576353 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.56■□□□□ 0.72
SNF8-217ENST00000576353 WBP4O75554 376 aaKnown RBP19.56■□□□□ 0.72
SNF8-217ENST00000576353 HTR1AP08908 422 aa19.56■□□□□ 0.72
SNF8-217ENST00000576353 KIR3DL2P43630 455 aa19.56■□□□□ 0.72
SNF8-217ENST00000576353 PAX8Q06710 450 aa19.56■□□□□ 0.72
SNF8-217ENST00000576353 IL18R1Q13478 541 aa19.56■□□□□ 0.72
SNF8-217ENST00000576353 DMRTC1Q5HYR2 192 aa19.56■□□□□ 0.72
SNF8-217ENST00000576353 TMEM244Q5VVB8 128 aa19.56■□□□□ 0.72
SNF8-217ENST00000576353 ZNF573Q86YE8 665 aa19.56■□□□□ 0.72
SNF8-217ENST00000576353 OR52I1Q8NGK6 324 aa19.56■□□□□ 0.72
SNF8-217ENST00000576353 RNF166Q96A37 237 aaPredicted RBP19.56■□□□□ 0.72
SNF8-217ENST00000576353 C10orf35Q96D05 121 aa19.56■□□□□ 0.72
SNF8-217ENST00000576353 VCXQ9H320 206 aa19.56■□□□□ 0.72
SNF8-217ENST00000576353 GPR173Q9NS66 373 aa19.56■□□□□ 0.72
SNF8-217ENST00000576353 ERVK13-1Q9NX77 482 aa19.56■□□□□ 0.72
SNF8-217ENST00000576353 CTSZQ9UBR2 303 aa19.56■□□□□ 0.72
SNF8-217ENST00000576353 ATRQ13535 2644 aa19.55■□□□□ 0.72
SNF8-217ENST00000576353 KIR2DS1A0A191URI9 304 aa19.55■□□□□ 0.72
SNF8-217ENST00000576353 LOC107986453A0A1B0GWG9 222 aa19.55■□□□□ 0.72
SNF8-217ENST00000576353 ANKRD61A6NGH8 418 aa19.55■□□□□ 0.72
SNF8-217ENST00000576353 A6NIN4 97 aa19.55■□□□□ 0.72
SNF8-217ENST00000576353 TMPRSS2O15393 492 aa19.55■□□□□ 0.72
SNF8-217ENST00000576353 AKR7A2O43488 359 aa19.55■□□□□ 0.72
SNF8-217ENST00000576353 CLIC3O95833 236 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms