RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 FAM71F1Q96KD3 344 aaPredicted RBP7.2□□□□□ -1.26
SMG6-216ENST00000575176 C1orf147Q96MC9 270 aaPredicted RBP7.2□□□□□ -1.26
SMG6-216ENST00000575176 SSBP3Q9BWW4 388 aaPredicted RBP7.2□□□□□ -1.26
SMG6-216ENST00000575176 BEX2Q9BXY8 128 aa7.2□□□□□ -1.26
SMG6-216ENST00000575176 SP140LQ9H930 580 aa7.2□□□□□ -1.26
SMG6-216ENST00000575176 ISG20L2Q9H9L3 353 aaKnown RBP7.2□□□□□ -1.26
SMG6-216ENST00000575176 FN3KRPQ9HA64 309 aa7.2□□□□□ -1.26
SMG6-216ENST00000575176 RNPEPL1Q9HAU8 725 aa7.2□□□□□ -1.26
SMG6-216ENST00000575176 HES4Q9HCC6 221 aa7.2□□□□□ -1.26
SMG6-216ENST00000575176 ESM1Q9NQ30 184 aa7.2□□□□□ -1.26
SMG6-216ENST00000575176 FRRS1LQ9P0K9 344 aa7.2□□□□□ -1.26
SMG6-216ENST00000575176 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.2□□□□□ -1.26
SMG6-216ENST00000575176 NOP16Q9Y3C1 178 aaKnown RBP7.2□□□□□ -1.26
SMG6-216ENST00000575176 GMPPBQ9Y5P6 360 aa7.2□□□□□ -1.26
SMG6-216ENST00000575176 IGKV1D-17A0A075B6S4 117 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 IGKV1-9A0A0C4DH69 117 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 A0A0G2JMP0 313 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 A0A0X1KG70 313 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 CDIPTO14735 213 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 FOXH1O75593 365 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 LALBAP00709 142 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 PLATP00750 562 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 GRPP07492 148 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 RPS2P15880 293 aaKnown RBP7.19□□□□□ -1.26
SMG6-216ENST00000575176 CPT2P23786 658 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 PITPNBP48739 271 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 GPM6AP51674 278 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 ERVK11-1P61568 191 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 IL5RAQ01344 420 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 GABPB1Q06547 395 aaPredicted RBP7.19□□□□□ -1.26
SMG6-216ENST00000575176 UBE2V2Q15819 145 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 BCL2L15Q5TBC7 163 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 ATPAF1Q5TC12 328 aaPredicted RBP7.19□□□□□ -1.26
SMG6-216ENST00000575176 SFRP4Q6FHJ7 346 aaPredicted RBP7.19□□□□□ -1.26
SMG6-216ENST00000575176 CALHM1Q8IU99 346 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.19□□□□□ -1.26
SMG6-216ENST00000575176 C1orf87Q8N0U7 546 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 KLHL36Q8N4N3 616 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 FAM216BQ8N7L0 139 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 OR4M2Q8NGB6 313 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 OR52I1Q8NGK6 324 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 OR10Z1Q8NGY1 313 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 ANGPTL6Q8NI99 470 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 CNIH3Q8TBE1 160 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 AQP3Q92482 292 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 RFKQ969G6 155 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 ITFG2Q969R8 447 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 UPRTQ96BW1 309 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 ADAT3Q96EY9 351 aaPredicted RBP7.19□□□□□ -1.26
SMG6-216ENST00000575176 ZNF48Q96MX3 618 aaPredicted RBP7.19□□□□□ -1.26
SMG6-216ENST00000575176 GAFA1Q96PS6 74 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 CHST5Q9GZS9 411 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 AMBNQ9NP70 447 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 FGF20Q9NP95 211 aaPredicted RBP7.19□□□□□ -1.26
SMG6-216ENST00000575176 IMPAD1Q9NX62 359 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 ERVK13-1Q9NX77 482 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 PIGLQ9Y2B2 252 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 SNX5Q9Y5X3 404 aa7.19□□□□□ -1.26
SMG6-216ENST00000575176 SOX21Q9Y651 276 aaPredicted RBP7.19□□□□□ -1.26
SMG6-216ENST00000575176 A6NIN4 97 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 LRRC30A6NM36 301 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 F8VVB4 439 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 F8VWA3 439 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 SYNGR1O43759 233 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 RPP14O95059 124 aaKnown RBP7.18□□□□□ -1.26
SMG6-216ENST00000575176 VENTXO95231 258 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 GYPAP02724 150 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 ISG15P05161 165 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 KRT8P05787 483 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 PGA5P0DJD9 388 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 PPIAL4GP0DN37 164 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 IGHV4-38-2P0DP08 117 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 GATA3P23771 443 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 MAP2K3P46734 347 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 TGM4P49221 684 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 ACTC1P68032 377 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 ACTA1P68133 377 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 RAB40BQ12829 278 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 GALEQ14376 348 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 DGUOKQ16854 277 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 LRRC36Q1X8D7 754 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 DCAF12L2Q5VW00 463 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 ZNF788Q6ZQV5 615 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 C9orf139Q6ZV77 190 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 DOK3Q7L591 496 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 PEG10Q86TG7 708 aaKnown RBP7.18□□□□□ -1.26
SMG6-216ENST00000575176 RDH10Q8IZV5 341 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 SYS1Q8N2H4 156 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 ACBD7Q8N6N7 88 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 YIPF7Q8N8F6 280 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 LY6G5BQ8NDX9 201 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 OR11L1Q8NGX0 322 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 OR8S1Q8NH09 359 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 PIGCQ92535 297 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 C12orf43Q96C57 262 aaKnown RBP7.18□□□□□ -1.26
SMG6-216ENST00000575176 C4orf36Q96KX1 117 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 ZNF488Q96MN9 340 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 TBX15Q96SF7 602 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 NRIP2Q9BQI9 281 aa7.18□□□□□ -1.26
SMG6-216ENST00000575176 ADI1Q9BV57 179 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms