RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 BTNL3Q6UXE8 466 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 Q6ZSR3 168 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 KCTD8Q6ZWB6 473 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 THAP5Q7Z6K1 395 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 OR10Z1Q8NGY1 313 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 SEH1LQ96EE3 360 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 SLC6A7Q99884 636 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 NUDT16L1Q9BRJ7 211 aaKnown RBP10.83□□□□□ -0.68
CNOT1-220ENST00000569916 ERVK-18Q9QC07 812 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 AASSQ9UDR5 926 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 ENPP5Q9UJA9 477 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 GMPPBQ9Y5P6 360 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 V9GYS6 101 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 A0A1B0GW55 424 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 ZNF732B4DXR9 585 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 J3QRE1 110 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 DUX4L2P0CJ85 424 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 DUX4L3P0CJ86 424 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 DUX4L4P0CJ87 422 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 DUX4L5P0CJ88 424 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 DUX4L6P0CJ89 424 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 DUX4L7P0CJ90 424 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 PPIAL4GP0DN37 164 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 CCL1P22362 96 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 HILS1P60008 231 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 GNG3P63215 75 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 MICBQ29980 383 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 TUSC1Q2TAM9 212 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 WDR38Q5JTN6 314 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 PLCXD3Q63HM9 321 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 TMEM42Q69YG0 159 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 STUMQ69YW2 141 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 DUX4L9Q6RFH8 374 aaPredicted RBP10.82□□□□□ -0.68
CNOT1-220ENST00000569916 ZBTB49Q6ZSB9 765 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 USP43Q70EL4 1123 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 MOB3CQ70IA8 216 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 CATSPERDQ86XM0 798 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 ENTHD1Q8IYW4 607 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 OR14K1Q8NGZ2 314 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 ZNF418Q8TF45 676 aaPredicted RBP10.82□□□□□ -0.68
CNOT1-220ENST00000569916 C22orf15Q8WYQ4 148 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 RORBQ92753 470 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 UPRTQ96BW1 309 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 C12orf43Q96C57 262 aaKnown RBP10.82□□□□□ -0.68
CNOT1-220ENST00000569916 RNFT2Q96EX2 444 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 HIST1H2AAQ96QV6 131 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 WDR13Q9H1Z4 485 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 RASSF4Q9H2L5 321 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 OR51I2Q9H344 312 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 ACOXLQ9NUZ1 547 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 DUX4Q9UBX2 424 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 NUP50Q9UKX7 468 aa10.82□□□□□ -0.68
CNOT1-220ENST00000569916 OR5B21A6NL26 309 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 DHRS7CA6NNS2 312 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 DVL1O14640 695 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 TMPRSS2O15393 492 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 AKR7A2O43488 359 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 ENSAO43768 121 aaKnown RBP10.81□□□□□ -0.68
CNOT1-220ENST00000569916 RHBDL1O75783 438 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 NRASP01111 189 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 AMY2BP19961 511 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 ACTC1P68032 377 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 ACTA1P68133 377 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 ZNF91Q05481 1191 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 ZSCAN26Q16670 478 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 TP53I3Q53FA7 332 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 CLVS2Q5SYC1 327 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 DOK3Q7L591 496 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 PRSS35Q8N3Z0 413 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 FGFRL1Q8N441 504 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 BPIFB2Q8N4F0 458 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 OR5A2Q8NGI9 324 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 STMN2Q93045 179 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 RNF166Q96A37 237 aaPredicted RBP10.81□□□□□ -0.68
CNOT1-220ENST00000569916 CCL13Q99616 98 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 SUCNR1Q9BXA5 334 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 ZNF69Q9UC07 566 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 GNG8Q9UK08 70 aa10.81□□□□□ -0.68
CNOT1-220ENST00000569916 TRAV40A0A0B4J280 105 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 LOC100130705A0A1B0GUX0 176 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 DLGAP1O14490 977 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 BAG2O95816 211 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 IGHV4-38-2P0DP08 117 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 KIR3DL2P43630 455 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 GMFBP60983 142 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 FGF12P61328 243 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 ODF4Q2M2E3 257 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 CDONQ4KMG0 1287 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 CD276Q5ZPR3 534 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 FAM220AQ7Z4H9 259 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 FAM216BQ8N7L0 139 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 OR5T2Q8NGG2 359 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 RHOXF1Q8NHV9 184 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 AQP3Q92482 292 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 LGALS12Q96DT0 336 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 ESM1Q9NQ30 184 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 GPR173Q9NS66 373 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 SNTG1Q9NSN8 517 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 FAM118AQ9NWS6 357 aa10.8□□□□□ -0.68
CNOT1-220ENST00000569916 DNAJB11Q9UBS4 358 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms