RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 H3BNX3 289 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 P2RY10O00398 339 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 MAGEB4O15481 346 aaPredicted RBP6.45□□□□□ -1.38
CDH3-209ENST00000569080 DHRS3O75911 302 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 LIPFP07098 398 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 ATP6V1B1P15313 513 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 FAHP16930 419 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 CCL1P22362 96 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 TGM4P49221 684 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 GPM6AP51674 278 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 RIDAP52758 137 aaKnown RBP6.45□□□□□ -1.38
CDH3-209ENST00000569080 CXCR4P61073 352 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 BAMBIQ13145 260 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 DGUOKQ16854 277 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 DEFB112Q30KQ8 113 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 ZNF829Q3KNS6 432 aaPredicted RBP6.45□□□□□ -1.38
CDH3-209ENST00000569080 CEACAM21Q3KPI0 293 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 DMRTC1Q5HYR2 192 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 CEP78Q5JTW2 689 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 ZNF684Q5T5D7 378 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 ZBTB37Q5TC79 503 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 GPR157Q5UAW9 335 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 CD276Q5ZPR3 534 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 ZNF322Q6U7Q0 402 aaPredicted RBP6.45□□□□□ -1.38
CDH3-209ENST00000569080 ZNF788Q6ZQV5 615 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 PLEKHG7Q6ZR37 379 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 BTN2A1Q7KYR7 527 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 GID4Q8IVV7 300 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 SLC35F2Q8IXU6 374 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 ANGPTL6Q8NI99 470 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 C8orf46Q8TAG6 207 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 ST8SIA4Q92187 359 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 PIGCQ92535 297 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 TAF15Q92804 592 aaKnown RBP eCLIP6.45□□□□□ -1.38
CDH3-209ENST00000569080 GCDHQ92947 438 aaPredicted RBP6.45□□□□□ -1.38
CDH3-209ENST00000569080 ITFG2Q969R8 447 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 RNF166Q96A37 237 aaPredicted RBP6.45□□□□□ -1.38
CDH3-209ENST00000569080 FAM71F1Q96KD3 344 aaPredicted RBP6.45□□□□□ -1.38
CDH3-209ENST00000569080 GAFA1Q96PS6 74 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 IL4I1Q96RQ9 567 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 MNTQ99583 582 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 APOL4Q9BPW4 351 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 PCGF1Q9BSM1 259 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 OSBPL10Q9BXB5 764 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 DNTTIP1Q9H147 329 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 SEMA6AQ9H2E6 1030 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 MOB1AQ9H8S9 216 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 R4GMQ9 66 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 V9GYS6 101 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 IGKV1D-17A0A075B6S4 117 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 OR5B21A6NL26 309 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 LOC110117498-PIK3R3F6TDL0 507 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 SIGLEC5O15389 551 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 HOXA3O43365 443 aaPredicted RBP6.44□□□□□ -1.38
CDH3-209ENST00000569080 AKR7A2O43488 359 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 TOX4O94842 621 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 APOL3O95236 402 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 ECDO95905 644 aaPredicted RBP6.44□□□□□ -1.38
CDH3-209ENST00000569080 ALPLP05186 524 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 HTR1FP30939 366 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 MAP2K3P46734 347 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 MTNR1AP48039 350 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 BPIFB3P59826 476 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 ACTR3P61158 418 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 ISL1P61371 349 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 GNG3P63215 75 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 EGR3Q06889 387 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 CDONQ4KMG0 1287 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 METTL11BQ5VVY1 283 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 RBMS3Q6XE24 437 aaKnown RBP6.44□□□□□ -1.38
CDH3-209ENST00000569080 SLC36A1Q7Z2H8 476 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 ELMOD2Q8IZ81 293 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 PIP4P2Q8N4L2 257 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 KIR3DL3Q8N743 410 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 Q8N7P7 452 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 PNLDC1Q8NA58 520 aaKnown RBP6.44□□□□□ -1.38
CDH3-209ENST00000569080 OR5T2Q8NGG2 359 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 OR51G2Q8NGK0 314 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 OR14K1Q8NGZ2 314 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 FAM81AQ8TBF8 368 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 PYDC1Q8WXC3 89 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 AQP3Q92482 292 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 TNFRSF14Q92956 283 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 CENPNQ96H22 339 aaPredicted RBP6.44□□□□□ -1.38
CDH3-209ENST00000569080 RNF170Q96K19 258 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 DMRTB1Q96MA1 342 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 DCTN5Q9BTE1 182 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 SNTG1Q9NSN8 517 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 NLKQ9UBE8 527 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 WARS2Q9UGM6 360 aaKnown RBP6.44□□□□□ -1.38
CDH3-209ENST00000569080 ENOPH1Q9UHY7 261 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 IKZF2Q9UKS7 526 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 KPTNQ9Y664 436 aa6.44□□□□□ -1.38
CDH3-209ENST00000569080 IGHV1-69DA0A0B4J2H0 117 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 A0A1W2PQL4 384 aaPredicted RBP6.43□□□□□ -1.38
CDH3-209ENST00000569080 PQLC2LA1A4F0 135 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 SAC3D1A6NKF1 404 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 OR2AT4A6NND4 320 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 DHRS7CA6NNS2 312 aa6.43□□□□□ -1.38
CDH3-209ENST00000569080 ZNF732B4DXR9 585 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms