RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 OR2B8PP59922 312 aa3□□□□□ -1.93
CHD9-213ENST00000564845 AANATQ16613 207 aa3□□□□□ -1.93
CHD9-213ENST00000564845 CPOQ8IVL8 374 aa3□□□□□ -1.93
CHD9-213ENST00000564845 LSM14AQ8ND56 463 aaKnown RBP3□□□□□ -1.93
CHD9-213ENST00000564845 NUBPLQ8TB37 319 aa3□□□□□ -1.93
CHD9-213ENST00000564845 ZNF845Q96IR2 970 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 MFRPQ9BY79 579 aa3□□□□□ -1.93
CHD9-213ENST00000564845 ARRDC1-AS1Q9H2J1 176 aa3□□□□□ -1.93
CHD9-213ENST00000564845 BCO1Q9HAY6 547 aa3□□□□□ -1.93
CHD9-213ENST00000564845 SEBOXQ9HB31 216 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 HMX3A6NHT5 357 aa3□□□□□ -1.93
CHD9-213ENST00000564845 MCRIP1C9JLW8 97 aa3□□□□□ -1.93
CHD9-213ENST00000564845 MMP9P14780 707 aa3□□□□□ -1.93
CHD9-213ENST00000564845 RAB3BP20337 219 aa3□□□□□ -1.93
CHD9-213ENST00000564845 VAMP1P23763 118 aa3□□□□□ -1.93
CHD9-213ENST00000564845 OPRM1P35372 400 aa3□□□□□ -1.93
CHD9-213ENST00000564845 HOXA1P49639 335 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 KRTCAP3Q53RY4 240 aa3□□□□□ -1.93
CHD9-213ENST00000564845 FAM26EQ8N5C1 309 aa3□□□□□ -1.93
CHD9-213ENST00000564845 YIPF7Q8N8F6 280 aa3□□□□□ -1.93
CHD9-213ENST00000564845 OR5H2Q8NGV7 314 aa3□□□□□ -1.93
CHD9-213ENST00000564845 OR6K3Q8NGY3 331 aa3□□□□□ -1.93
CHD9-213ENST00000564845 OR51Q1Q8NH59 317 aa3□□□□□ -1.93
CHD9-213ENST00000564845 THEM6Q8WUY1 208 aa3□□□□□ -1.93
CHD9-213ENST00000564845 INTS14Q96SY0 518 aa3□□□□□ -1.93
CHD9-213ENST00000564845 MED29Q9NX70 200 aa3□□□□□ -1.93
CHD9-213ENST00000564845 TP53BP1Q12888 1972 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 GGCTO75223 188 aaKnown RBP3□□□□□ -1.93
CHD9-213ENST00000564845 GLI4P10075 376 aa3□□□□□ -1.93
CHD9-213ENST00000564845 PMCHP20382 165 aa3□□□□□ -1.93
CHD9-213ENST00000564845 PSG6Q00889 435 aa3□□□□□ -1.93
CHD9-213ENST00000564845 CD83Q01151 205 aa3□□□□□ -1.93
CHD9-213ENST00000564845 PRDX4Q13162 271 aa3□□□□□ -1.93
CHD9-213ENST00000564845 IDO2Q6ZQW0 420 aa3□□□□□ -1.93
CHD9-213ENST00000564845 DPY19L4Q7Z388 723 aa3□□□□□ -1.93
CHD9-213ENST00000564845 GABRG1Q8N1C3 465 aa3□□□□□ -1.93
CHD9-213ENST00000564845 TNFRSF14Q92956 283 aa3□□□□□ -1.93
CHD9-213ENST00000564845 ZNF582Q96NG8 517 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 MCHR1Q99705 422 aa3□□□□□ -1.93
CHD9-213ENST00000564845 ABHD6Q9BV23 337 aa3□□□□□ -1.93
CHD9-213ENST00000564845 METTL17Q9H7H0 456 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 CALHM2Q9HA72 323 aa3□□□□□ -1.93
CHD9-213ENST00000564845 HES4Q9HCC6 221 aa3□□□□□ -1.93
CHD9-213ENST00000564845 SH3BGRL2Q9UJC5 107 aa3□□□□□ -1.93
CHD9-213ENST00000564845 SOX21Q9Y651 276 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 MXRA5Q9NR99 2828 aa3□□□□□ -1.93
CHD9-213ENST00000564845 UNC13CQ8NB66 2214 aa3□□□□□ -1.93
CHD9-213ENST00000564845 THADAQ6YHU6 1953 aa3□□□□□ -1.93
CHD9-213ENST00000564845 DEGS1O15121 323 aa3□□□□□ -1.93
CHD9-213ENST00000564845 SCGB1D2O95969 90 aa3□□□□□ -1.93
CHD9-213ENST00000564845 FXYD6P3P58550 94 aa3□□□□□ -1.93
CHD9-213ENST00000564845 ERHP84090 104 aaKnown RBP3□□□□□ -1.93
CHD9-213ENST00000564845 GUCA2AQ02747 115 aa3□□□□□ -1.93
CHD9-213ENST00000564845 SNTB2Q13425 540 aaKnown RBP3□□□□□ -1.93
CHD9-213ENST00000564845 P2RY6Q15077 328 aa3□□□□□ -1.93
CHD9-213ENST00000564845 SLC16A14Q7RTX9 510 aa3□□□□□ -1.93
CHD9-213ENST00000564845 ADGRE4PQ86SQ3 457 aa3□□□□□ -1.93
CHD9-213ENST00000564845 SPACA9Q96E40 222 aaPredicted RBP3□□□□□ -1.93
CHD9-213ENST00000564845 SPXQ9BT56 116 aa3□□□□□ -1.93
CHD9-213ENST00000564845 PPIL1Q9Y3C6 166 aa3□□□□□ -1.93
CHD9-213ENST00000564845 SPTBN2O15020 2390 aa3□□□□□ -1.93
CHD9-213ENST00000564845 NCOR1O75376 2440 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 ZSCAN5BA6NJL1 495 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 PRR32B1ATL7 298 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 ARHGAP33O14559 1287 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 WDR1O75083 606 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 MRPL33O75394 65 aaKnown RBP2.99□□□□□ -1.93
CHD9-213ENST00000564845 MAS1P04201 325 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 HIST1H1CP16403 213 aaKnown RBP2.99□□□□□ -1.93
CHD9-213ENST00000564845 SHC1P29353 583 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 AKR1C2P52895 323 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 TNFRSF17Q02223 184 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 ARL16Q0P5N6 197 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 SLC17A1Q14916 467 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 SLC25A35Q3KQZ1 300 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 MFSD9Q8NBP5 474 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 OR6M1Q8NGM8 313 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 HRASLS5Q96KN8 279 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 AMELYQ99218 206 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 CITED1Q99966 193 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 NXF5Q9H1B4 397 aaKnown RBP2.99□□□□□ -1.93
CHD9-213ENST00000564845 AAMDCQ9H7C9 122 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 DIDO1Q9BTC0 2240 aaKnown RBP2.99□□□□□ -1.93
CHD9-213ENST00000564845 A0A1W2PQD3 144 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 DDAH2O95865 285 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 MT-ND6P03923 174 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 NUTF2P61970 127 aaKnown RBP2.99□□□□□ -1.93
CHD9-213ENST00000564845 EFNB1P98172 346 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 ENDOGQ14249 297 aaKnown RBP2.99□□□□□ -1.93
CHD9-213ENST00000564845 ZNF345Q14585 488 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 KRBOX4Q5JUW0 171 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 C19orf48Q6RUI8 117 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 CD300LDQ6UXZ3 194 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 DOLPP1Q86YN1 238 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 OR1L3Q8NH93 324 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 CMTM2Q8TAZ6 248 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 COL25A1Q9BXS0 654 aaPredicted RBP2.99□□□□□ -1.93
CHD9-213ENST00000564845 SLC25A32Q9H2D1 315 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 ZNF581Q9P0T4 197 aa2.99□□□□□ -1.93
CHD9-213ENST00000564845 LRFN1Q9P244 771 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms