RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 FBXW12Q6X9E4 464 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 ZSCAN4Q8NAM6 433 aaPredicted RBP13.43□□□□□ -0.26
COMMD4-210ENST00000564587 PXT1Q8NFP0 134 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 OR56B2PQ8NGI1 322 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 OR56B1Q8NGI3 324 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 MS4A3Q96HJ5 214 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 C1orf147Q96MC9 270 aaPredicted RBP13.43□□□□□ -0.26
COMMD4-210ENST00000564587 SPACA5Q96QH8 159 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 METTL9Q9H1A3 318 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 ASF1BQ9NVP2 202 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 MTFP1Q9UDX5 166 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 ING4Q9UNL4 249 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 MPC1Q9Y5U8 109 aa13.43□□□□□ -0.26
COMMD4-210ENST00000564587 FREM2Q5SZK8 3169 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 ANKRD30BLA7E2S9 258 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 CD300LBA8K4G0 201 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 RAB27BO00194 218 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 CDC14BO60729 498 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 KDM4BO94953 1096 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 MPIG6BO95866 241 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 NGFP01138 241 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 IGLV1-44P01699 117 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 LPLP06858 475 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 CSF1P09603 554 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 SPNP16150 400 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 RAD52P43351 418 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 CASP6P55212 293 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 SNTB2Q13425 540 aaKnown RBP13.42□□□□□ -0.26
COMMD4-210ENST00000564587 OR10K2Q6IF99 312 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 ASCL4Q6XD76 172 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 MRGPRGQ86SM5 289 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 ZDHHC23Q8IYP9 409 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 NAXEQ8NCW5 288 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 OR10R2Q8NGX6 335 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 NPRL2Q8WTW4 380 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 MRPS24Q96EL2 167 aaKnown RBP13.42□□□□□ -0.26
COMMD4-210ENST00000564587 WBP1Q96G27 269 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 DPAGT1Q9H3H5 408 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 KCNK15Q9H427 330 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 ELOVL5Q9NYP7 299 aa13.42□□□□□ -0.26
COMMD4-210ENST00000564587 DMXL2Q8TDJ6 3036 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 FAM230AA0A1W2PPH8 454 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 ANKRD20A5PA0PJZ0 165 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 ZNF850A8MQ14 1090 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 SMPD2O60906 423 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 CRTAPO75718 401 aaPredicted RBP13.41□□□□□ -0.26
COMMD4-210ENST00000564587 MELTFP08582 738 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 GSTP1P09211 210 aaKnown RBP13.41□□□□□ -0.26
COMMD4-210ENST00000564587 TMEM225BP0DP42 221 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 RAC2P15153 192 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 SLC6A1P30531 599 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 KIR2DL3P43628 341 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 ZP1P60852 638 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 PPP1CBP62140 327 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 RPS27AP62979 156 aaKnown RBP13.41□□□□□ -0.26
COMMD4-210ENST00000564587 PRDX4Q13162 271 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 CEACAM21Q3KPI0 293 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 SLC22A6Q4U2R8 563 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 ZNF474Q6S9Z5 364 aaPredicted RBP13.41□□□□□ -0.26
COMMD4-210ENST00000564587 SAXO1Q8IYX7 474 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 OR5A2Q8NGI9 324 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 GPX8Q8TED1 209 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 AQP3Q92482 292 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 CREB3L1Q96BA8 519 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 MUCL1Q96DR8 90 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 NKX3-1Q99801 234 aaPredicted RBP13.41□□□□□ -0.26
COMMD4-210ENST00000564587 PAPOLGQ9BWT3 736 aaKnown RBP13.41□□□□□ -0.26
COMMD4-210ENST00000564587 TM2D1Q9BX74 207 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 BCL2L14Q9BZR8 327 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 LPAR5Q9H1C0 372 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 OR10A4Q9H209 315 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 IL36GQ9NZH8 169 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 NPAP1Q9NZP6 1156 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 SLC25A15Q9Y619 301 aa13.41□□□□□ -0.26
COMMD4-210ENST00000564587 OR5B21A6NL26 309 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 A8MXE2 369 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 CSTBP04080 98 aaKnown RBP13.4□□□□□ -0.26
COMMD4-210ENST00000564587 FAM157BP0CG42 384 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 CPT2P23786 658 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 UCP2P55851 309 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 RSU1Q15404 277 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 PNLIPRP3Q17RR3 467 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 ZNF260Q3ZCT1 412 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 RNASE12Q5GAN4 147 aaKnown RBP13.4□□□□□ -0.26
COMMD4-210ENST00000564587 OLFML2AQ68BL7 652 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 CRIP3Q6Q6R5 217 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 RFPL4BQ6ZWI9 263 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 BIVMQ86UB2 503 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 FAM89BQ8N5H3 189 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 ACBD4Q8NC06 268 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 CHST4Q8NCG5 386 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 NEDD4LQ96PU5 975 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 VKORC1Q9BQB6 163 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 ACTR6Q9GZN1 396 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 PRORYQ9H606 182 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 MRPL15Q9P015 296 aaKnown RBP13.4□□□□□ -0.26
COMMD4-210ENST00000564587 MYEF2Q9P2K5 600 aaKnown RBP13.4□□□□□ -0.26
COMMD4-210ENST00000564587 NUBP2Q9Y5Y2 271 aa13.4□□□□□ -0.26
COMMD4-210ENST00000564587 LOC400499M0QZD8 3231 aa13.39□□□□□ -0.27
COMMD4-210ENST00000564587 MYO7BQ6PIF6 2116 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms