RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ZBTB46Q86UZ6 589 aa6.09□□□□□ -1.43
HERPUD1-206ENST00000563343 OFCC1Q8IZS5 231 aa6.09□□□□□ -1.43
HERPUD1-206ENST00000563343 KLHL30-AS1Q8NEE0 82 aa6.09□□□□□ -1.43
HERPUD1-206ENST00000563343 OR10A6Q8NH74 314 aa6.09□□□□□ -1.43
HERPUD1-206ENST00000563343 ISOC1Q96CN7 298 aa6.09□□□□□ -1.43
HERPUD1-206ENST00000563343 HSH2DQ96JZ2 352 aa6.09□□□□□ -1.43
HERPUD1-206ENST00000563343 CGREF1Q99674 301 aa6.09□□□□□ -1.43
HERPUD1-206ENST00000563343 TMEM109Q9BVC6 243 aa6.09□□□□□ -1.43
HERPUD1-206ENST00000563343 OPA3Q9H6K4 179 aa6.09□□□□□ -1.43
HERPUD1-206ENST00000563343 ZFP57Q9NU63 452 aa6.09□□□□□ -1.43
HERPUD1-206ENST00000563343 USE1Q9NZ43 259 aa6.09□□□□□ -1.43
HERPUD1-206ENST00000563343 BAG5Q9UL15 447 aa6.09□□□□□ -1.43
HERPUD1-206ENST00000563343 HILPDAQ9Y5L2 63 aa6.09□□□□□ -1.43
HERPUD1-206ENST00000563343 PSMB11A5LHX3 300 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 J3KTA2 159 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 CCL24O00175 119 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 XRCC2O43543 280 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 NDUFB2O95178 105 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 PGA5P0DJD9 388 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 SLC2A1P11166 492 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 CRABP1P29762 137 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 CENPAP49450 140 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 RPL31P62899 125 aaKnown RBP6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 TNFAIP8L3Q5GJ75 292 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 TBPL2Q6SJ96 375 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 MBOAT2Q6ZWT7 520 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 TCF23Q7RTU1 214 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 PRSS45Q7RTY3 260 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 PIGWQ7Z7B1 504 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 DHDDSQ86SQ9 333 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 CALHM1Q8IU99 346 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 RNF113BQ8IZP6 322 aaKnown RBP6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 CD177Q8N6Q3 437 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 OR4M1Q8NGD0 313 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 OR2AJ1Q8NGZ0 328 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 SPTSSAQ969W0 71 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 RBM14Q96PK6 669 aaKnown RBP6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 ZMAT4Q9H898 229 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 SP140LQ9H930 580 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 SRA1Q9HD15 236 aaKnown RBP6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 RHCGQ9UBD6 479 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 RHBDD3Q9Y3P4 386 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 IER3IP1Q9Y5U9 82 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 SNX13Q9Y5W8 968 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 LYVE1Q9Y5Y7 322 aa6.08□□□□□ -1.44
HERPUD1-206ENST00000563343 TMEM210A6NLX4 147 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 SEC14L6B5MCN3 397 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 MTRF1O75570 445 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 OR2F2O95006 317 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 HCKP08631 526 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 GLRA1P23415 457 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 CD24P25063 80 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 RPS27P42677 84 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 YAP1P46937 504 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 PRKXP51817 358 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 STX1BP61266 288 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 SLC34A1Q06495 639 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 IFFO1Q0D2I5 559 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 KRT72Q14CN4 511 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 TRAM2Q15035 370 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 SEC23BQ15437 767 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 SLC36A3Q495N2 470 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 MINOS1Q5TGZ0 78 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 AGBL2Q5U5Z8 902 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 DNM1P34Q6PK57 102 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 LHFPL2Q6ZUX7 228 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 ZDHHC21Q8IVQ6 265 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 ZNF695Q8IW36 515 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 BCAS4Q8TDM0 211 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 HPSE2Q8WWQ2 592 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 OR5P3Q8WZ94 311 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 SGK3Q96BR1 496 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 SLC25A33Q9BSK2 321 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 YY1AP1Q9H869 796 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 TBC1D23Q9NUY8 699 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 ZNF319Q9P2F9 582 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 HHLA2Q9UM44 414 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 TMA7Q9Y2S6 64 aaKnown RBP6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 MINOS1-NBL1R4GNA1 71 aa6.07□□□□□ -1.44
HERPUD1-206ENST00000563343 hCG_1809904A0A1W2PP81 198 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 A0A1W2PPE2 198 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 A0A1W2PPH5 198 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 A0A1W2PR64 198 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 A0A1W2PRV1 198 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 NUDT19A8MXV4 375 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 RBP4P02753 201 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 GNALP38405 381 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 OR3A4PP47883 348 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 GSK3AP49840 483 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 OR12D2P58182 307 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 DEFB136Q30KP8 78 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 AGKQ53H12 422 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 CYBRD1Q53TN4 286 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 LCN8Q6JVE9 175 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 DPY19L2P2Q6ZN68 376 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 THAP5Q7Z6K1 395 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 OR5M8Q8NGP6 311 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 OR13D1Q8NGV5 346 aa6.06□□□□□ -1.44
HERPUD1-206ENST00000563343 OR2T27Q8NH04 317 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms