RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 DXOO77932 396 aaKnown RBP14.55□□□□□ -0.08
TPM1-228ENST00000560975 F10P00742 488 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 HIST1H2BJP06899 126 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 SEC11BP0C7V7 166 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 HIST1H2BOP23527 126 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 HIST1H2BBP33778 126 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 RABIFP47224 123 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 MMP16P51512 607 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 HIST1H2BDP58876 126 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 HIST1H2BCP62807 126 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 CCL20P78556 96 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 HIST2H2BEQ16778 126 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 KHDC3LQ587J8 217 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.55□□□□□ -0.08
TPM1-228ENST00000560975 C19orf47Q8N9M1 422 aaKnown RBP14.55□□□□□ -0.08
TPM1-228ENST00000560975 HIST1H2BHQ93079 126 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 RAB39BQ96DA2 213 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 HIST1H2BNQ99877 126 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 HIST1H2BMQ99879 126 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 TCEAL2Q9H3H9 227 aaPredicted RBP14.55□□□□□ -0.08
TPM1-228ENST00000560975 ANAPC10Q9UM13 185 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 HS3ST3B1Q9Y662 390 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 IGKV1D-8A0A087WSZ0 117 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 A0A087X0M5 115 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 A0A1B0GX30 115 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 MBPP02686 304 aaPredicted RBP14.55□□□□□ -0.08
TPM1-228ENST00000560975 FABP4P15090 132 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 ANOS1P23352 680 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 UCP2P55851 309 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 NHLH2Q02577 135 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 TANGO2Q6ICL3 276 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 ABHD12BQ7Z5M8 362 aaPredicted RBP14.55□□□□□ -0.08
TPM1-228ENST00000560975 STX12Q86Y82 276 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 SULF2Q8IWU5 870 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 REEP6Q96HR9 211 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 EMC6Q9BV81 110 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 SUCNR1Q9BXA5 334 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 SMOC1Q9H4F8 434 aa14.55□□□□□ -0.08
TPM1-228ENST00000560975 PHF3Q92576 2039 aaKnown RBP14.54□□□□□ -0.08
TPM1-228ENST00000560975 SLC31A2O15432 143 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 MT-ATP6P00846 226 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 DDTP30046 118 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 RUNX3Q13761 415 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 REC114Q7Z4M0 266 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 SGPP2Q8IWX5 399 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 OR5AS1Q8N127 324 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 DAZLQ92904 295 aaKnown RBP14.54□□□□□ -0.08
TPM1-228ENST00000560975 ZNF2Q9BSG1 426 aaPredicted RBP14.54□□□□□ -0.08
TPM1-228ENST00000560975 TMEM184BQ9Y519 407 aaPredicted RBP14.54□□□□□ -0.08
TPM1-228ENST00000560975 SPEGQ15772 3267 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 BTBD17A6NE02 478 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 NPIPA5E9PKD4 350 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 H0YL77 283 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 H3BQ15 152 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 PPP1R2P9O14990 202 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 CYB5BO43169 146 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 TRGC2P03986 189 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 CELA2BP08218 269 aaPredicted RBP14.54□□□□□ -0.08
TPM1-228ENST00000560975 SLC6A8P48029 635 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 UBE2KP61086 200 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 IGLV3-21P80748 117 aaPredicted RBP14.54□□□□□ -0.08
TPM1-228ENST00000560975 ZNF248Q8NDW4 579 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 RNF133Q8WVZ7 376 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 GALNT14Q96FL9 552 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 TCTN2Q96GX1 697 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 ABHD14AQ9BUJ0 271 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 NPIPA1Q9UND3 350 aa14.54□□□□□ -0.08
TPM1-228ENST00000560975 AHSA1O95433 338 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 HEXBP07686 556 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 IL12BP29460 328 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 BLVRBP30043 206 aaPredicted RBP14.53□□□□□ -0.08
TPM1-228ENST00000560975 MAS1LP35410 378 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 PPM1FP49593 454 aaPredicted RBP14.53□□□□□ -0.08
TPM1-228ENST00000560975 ERVFRD-1P60508 538 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 SSX2Q16385 188 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 HAGHQ16775 308 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 C4orf17Q53FE4 359 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 DBX2Q6ZNG2 339 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 C11orf40Q8WZ69 217 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 BMFQ96LC9 184 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 SSX3Q99909 188 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 TBL1XR1Q9BZK7 514 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 OR10A2Q9H208 303 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 PLEKHA2Q9HB19 425 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 CDRT15L2A8MXV6 281 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 SEC14L6B5MCN3 397 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 FCARP24071 287 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 APOBEC1P41238 236 aaKnown RBP14.53□□□□□ -0.08
TPM1-228ENST00000560975 P2RY1P47900 373 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 RGS19P49795 217 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 SLC37A1P57057 533 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 TAS2R46P59540 309 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 LSM6P62312 80 aaKnown RBP14.53□□□□□ -0.08
TPM1-228ENST00000560975 NKX6-1P78426 367 aaPredicted RBP14.53□□□□□ -0.08
TPM1-228ENST00000560975 ELOBQ15370 118 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 SLC37A2Q8TED4 501 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 NUDT16L1Q9BRJ7 211 aaKnown RBP14.53□□□□□ -0.08
TPM1-228ENST00000560975 ARV1Q9H2C2 271 aa14.53□□□□□ -0.08
TPM1-228ENST00000560975 RP1P56715 2156 aa14.52□□□□□ -0.08
TPM1-228ENST00000560975 ZNF587BE7ETH6 402 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms