RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 C1orf123Q9NWV4 160 aa12.99□□□□□ -0.33
RABGGTA-219ENST00000560871 RNF7Q9UBF6 113 aa12.99□□□□□ -0.33
RABGGTA-219ENST00000560871 CLEC2DQ9UHP7 191 aa12.99□□□□□ -0.33
RABGGTA-219ENST00000560871 KCNS2Q9ULS6 477 aa12.99□□□□□ -0.33
RABGGTA-219ENST00000560871 CAB39Q9Y376 341 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-219ENST00000560871 JMJD1CQ15652 2540 aa12.99□□□□□ -0.33
RABGGTA-219ENST00000560871 PPIAL4EA0A075B759 164 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 EFCAB10A6NFE3 127 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 A6NIN4 97 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 OR5B21A6NL26 309 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 CEACAM18A8MTB9 384 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 PPIAL4DF5H284 164 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 SLC1A7O00341 560 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 TGFAP01135 160 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 LHBP01229 141 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 PPIAL4FP0DN26 164 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 IRF2P14316 349 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 EGR1P18146 543 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 TGM4P49221 684 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 DMRTC1Q5HYR2 192 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 CLVS2Q5SYC1 327 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 OR2G6Q5TZ20 316 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 PLCXD3Q63HM9 321 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 XAF1Q6GPH4 301 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 AHSA2Q719I0 299 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 ZNF485Q8NCK3 441 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 BPIFB6Q8NFQ5 453 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 OR10AC1Q8NH08 325 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 HAVCR2Q8TDQ0 301 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 RNF170Q96K19 258 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 SHARPINQ9H0F6 387 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 METTL17Q9H7H0 456 aaPredicted RBP12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 PATZ1Q9HBE1 687 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 TMEM165Q9HC07 324 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 GPR173Q9NS66 373 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 UBAP1Q9NZ09 502 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 PPIAL4AQ9Y536 164 aa12.98□□□□□ -0.33
RABGGTA-219ENST00000560871 B4DSR2 109 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 CDIPTO14735 213 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 LALBAP00709 142 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 NRASP01111 189 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 MSMBP08118 114 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 ZNF12P17014 697 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 MYL12AP19105 171 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 CD80P33681 288 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 CFHR2P36980 270 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 VHLP40337 213 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 HSPA13P48723 471 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 GPM6AP51674 278 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 GNG3P63215 75 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 ST3GAL4Q11206 333 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 C6orf141Q5SZD1 244 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 MOB3CQ70IA8 216 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 KLHL36Q8N4N3 616 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 C19orf18Q8NEA5 215 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 OR5A2Q8NGI9 324 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 OR51A4Q8NGJ6 313 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 OR52N1Q8NH53 320 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 RPL3LQ92901 407 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 C10orf35Q96D05 121 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 TMEM246Q9BRR3 403 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 CHST5Q9GZS9 411 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 PLEKHA1Q9HB21 404 aa12.97□□□□□ -0.33
RABGGTA-219ENST00000560871 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.96□□□□□ -0.331e-6■■□□□ 14
RABGGTA-219ENST00000560871 hCG_1807616A0A1W2PRN6 198 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 ANKRD61A6NGH8 418 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 A8MXK9 166 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 SRRM5B3KS81 715 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 ZNF732B4DXR9 585 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 LGALS8O00214 317 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 ZFPL1O95159 310 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 CCDC159P0C7I6 412 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 GTF2A1P52655 376 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 GBX2P52951 348 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 DVL1P1P54792 670 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 SEC61A1P61619 476 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 CDK5R1Q15078 307 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 TEX36Q5VZQ5 186 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 KCTD8Q6ZWB6 473 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 SCCPDHQ8NBX0 429 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 OR10Z1Q8NGY1 313 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 LRRC29Q8WV35 223 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 ADAT3Q96EY9 351 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 HIST1H2AAQ96QV6 131 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 PDCD1LG2Q9BQ51 273 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 OR51I2Q9H344 312 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 PAK1IP1Q9NWT1 392 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 RAB26Q9ULW5 256 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 HHLA2Q9UM44 414 aa12.96□□□□□ -0.33
RABGGTA-219ENST00000560871 FBN1P35555 2871 aaKnown RBP12.96□□□□□ -0.34
RABGGTA-219ENST00000560871 CUBNO60494 3623 aa12.95□□□□□ -0.34
RABGGTA-219ENST00000560871 PQLC2LA1A4F0 135 aa12.95□□□□□ -0.34
RABGGTA-219ENST00000560871 OOEPA6NGQ2 149 aa12.95□□□□□ -0.34
RABGGTA-219ENST00000560871 TMEM212A6NML5 194 aa12.95□□□□□ -0.34
RABGGTA-219ENST00000560871 TNFRSF13BO14836 293 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-219ENST00000560871 C21orf33P30042 268 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-219ENST00000560871 DOC2BQ14184 412 aa12.95□□□□□ -0.34
RABGGTA-219ENST00000560871 UBE2V2Q15819 145 aa12.95□□□□□ -0.34
RABGGTA-219ENST00000560871 CCDC58Q4VC31 144 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms