RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 HOXA4Q00056 320 aaPredicted RBP10.38□□□□□ -0.75
SNX1-209ENST00000559961 CDK5Q00535 292 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 DHRS7BQ6IAN0 325 aaPredicted RBP10.38□□□□□ -0.75
SNX1-209ENST00000559961 C1orf122Q6ZSJ8 110 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 PRSS45Q7RTY3 260 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 C11orf53Q8IXP5 236 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 FAM216BQ8N7L0 139 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 DTX3Q8N9I9 347 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 UBE2FQ969M7 185 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 NRBF2Q96F24 287 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 RAB3IPQ96QF0 476 aaPredicted RBP10.38□□□□□ -0.75
SNX1-209ENST00000559961 DCTN5Q9BTE1 182 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 FAM234AQ9H0X4 552 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 PAPOLBQ9NRJ5 636 aaKnown RBP10.38□□□□□ -0.75
SNX1-209ENST00000559961 C1RLQ9NZP8 487 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 NLKQ9UBE8 527 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 ENOPH1Q9UHY7 261 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 ENPP5Q9UJA9 477 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 GTF2A1LQ9UNN4 478 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 LRP12Q9Y561 859 aa10.38□□□□□ -0.75
SNX1-209ENST00000559961 A0A0U1RQV5 110 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 OR5B21A6NL26 309 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 OR2AT4A6NND4 320 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 ZNF732B4DXR9 585 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 AKR7A2O43488 359 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 GPR137BO60478 399 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 IGHV4-59P01825 116 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 PRKACGP22612 351 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 IER3P46695 156 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 TGM4P49221 684 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 CEACAM21Q3KPI0 293 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 ZNF684Q5T5D7 378 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 PLCXD3Q63HM9 321 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 METAP1DQ6UB28 335 aaPredicted RBP10.37□□□□□ -0.75
SNX1-209ENST00000559961 MOB3CQ70IA8 216 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 LY6G5BQ8NDX9 201 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 OR8B12Q8NGG6 310 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 OR5A2Q8NGI9 324 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 OR5D13Q8NGL4 314 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 OR5R1Q8NH85 324 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 AMELYQ99218 206 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 TEAD3Q99594 435 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 METTL8Q9H825 291 aaKnown RBP10.37□□□□□ -0.75
SNX1-209ENST00000559961 SIRT7Q9NRC8 400 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 RASL12Q9NYN1 266 aa10.37□□□□□ -0.75
SNX1-209ENST00000559961 SF3B6Q9Y3B4 125 aaKnown RBP10.37□□□□□ -0.75
SNX1-209ENST00000559961 TRBV23-1A0A0A0MS06 115 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 MEIOCA2RUB1 952 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 M0R1W7 72 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 SLC1A7O00341 560 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 NPFFO15130 113 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 FKBP6O75344 327 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 ACAA1P09110 424 aaPredicted RBP10.36□□□□□ -0.75
SNX1-209ENST00000559961 T-ENOLP0DO92 83 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 ALOX5APP20292 161 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 DCTDP32321 178 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 TGFBR2P37173 567 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 CRISP1P54107 249 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 CAV3P56539 151 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 SMIM21Q3B7S5 101 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 FAM76BQ5HYJ3 339 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 CEP78Q5JTW2 689 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 ZBTB37Q5TC79 503 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 STUMQ69YW2 141 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 TRPM8Q7Z2W7 1104 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 WDR86Q86TI4 376 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 LDLRAD3Q86YD5 345 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 ZNF573Q86YE8 665 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 ZNF679Q8IYX0 411 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 TMEM185AQ8NFB2 350 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 CNN2Q99439 309 aaKnown RBP10.36□□□□□ -0.75
SNX1-209ENST00000559961 MNTQ99583 582 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 PBOV1Q9GZY1 135 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 SLC25A19Q9HC21 320 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 TCF7L1Q9HCS4 588 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 ZNF319Q9P2F9 582 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 PIGLQ9Y2B2 252 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 POLDIP2Q9Y2S7 368 aa10.36□□□□□ -0.75
SNX1-209ENST00000559961 A0A1W2PRD5 423 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 A0A1W2PRF3 423 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 A0A1W2PRM7 423 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 SLC22A31A6NKX4 558 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 SIGLEC5O15389 551 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 DNAJC8O75937 253 aaPredicted RBP10.35□□□□□ -0.75
SNX1-209ENST00000559961 NRASP01111 189 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 MRPL3P09001 348 aaKnown RBP10.35□□□□□ -0.75
SNX1-209ENST00000559961 ANOS1P23352 680 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 ACKR3P25106 362 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 RASSF2P50749 326 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 UBE2E1P51965 193 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 LGALS4P56470 323 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 ACSM1Q08AH1 577 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 TMEM236Q5W0B7 351 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 HAGHLQ6PII5 290 aaPredicted RBP10.35□□□□□ -0.75
SNX1-209ENST00000559961 ZNF788Q6ZQV5 615 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 TMEM179BQ7Z7N9 219 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 FAM185AQ8N0U4 392 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 BBS1Q8NFJ9 593 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 ANGPTL6Q8NI99 470 aa10.35□□□□□ -0.75
SNX1-209ENST00000559961 C8orf46Q8TAG6 207 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms