RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 ST3GAL3Q11203 375 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 ZBED5Q49AG3 693 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 ATPAF1Q5TC12 328 aaPredicted RBP7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 DLEU7Q6UYE1 221 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 KCTD8Q6ZWB6 473 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 CCDC80Q76M96 950 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 LINC00471Q8N535 108 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 KLHL30-AS1Q8NEE0 82 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 OR52H1Q8NGJ2 320 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 OR10A6Q8NH74 314 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 ANGPTL6Q8NI99 470 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 CAPSLQ8WWF8 208 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 LZICQ8WZA0 190 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 SPTSSAQ969W0 71 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 FOXRED1Q96CU9 486 aaPredicted RBP7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 TPD52L3Q96J77 140 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 RAB3IPQ96QF0 476 aaPredicted RBP7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 ROPN1BQ9BZX4 212 aaPredicted RBP7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 FN3KQ9H479 309 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 NMNAT1Q9HAN9 279 aaPredicted RBP7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 ROPN1Q9HAT0 212 aaPredicted RBP7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 PNRC2Q9NPJ4 139 aaKnown RBP7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 THAP1Q9NVV9 213 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 IER3IP1Q9Y5U9 82 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 PCLOQ9Y6V0 5065 aa7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 PLECQ15149 4684 aaKnown RBP7.13□□□□□ -1.27
SNRPA1-208ENST00000559686 FAM90A8PA6NJQ4 464 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 OR2AT4A6NND4 320 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 J3KTA2 159 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 RGS16O15492 202 aaPredicted RBP7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 TBX1O43435 398 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 AHCYL1O43865 530 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 JTBO76095 146 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 TROVE2P10155 538 aaKnown RBP eCLIP7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 PIPP12273 146 aaPredicted RBP7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 SLC7A2P52569 658 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 SLC25A1P53007 311 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 MXRA7P84157 204 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 VMACQ2NL98 169 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 KRT71Q3SY84 523 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 TMEM200BQ69YZ2 307 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 PGM2L1Q6PCE3 622 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 DNM1P34Q6PK57 102 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 ZNF730Q6ZMV8 503 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 PIGWQ7Z7B1 504 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 MREGQ8N565 214 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 DPP10Q8N608 796 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 SLC26A10Q8NG04 563 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 OR5K1Q8NHB7 308 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 RASSF5Q8WWW0 418 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 PAPOLGQ9BWT3 736 aaKnown RBP7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 WDR12Q9GZL7 423 aaKnown RBP7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 NLKQ9UBE8 527 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 BAG5Q9UL15 447 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 A4GNTQ9UNA3 340 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 RABL2BQ9UNT1 228 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 GMEB1Q9Y692 573 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 ALMS1Q8TCU4 4167 aa7.12□□□□□ -1.27
SNRPA1-208ENST00000559686 IGKV1D-17A0A075B6S4 117 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 IGLV1-36A0A0B4J1U3 117 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 PSMB11A5LHX3 300 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 SNNO75324 88 aaPredicted RBP7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 PSG2P11465 335 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 GLRA1P23415 457 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 CRABP1P29762 137 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 OR12D2P58182 307 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 RPL23AP62750 156 aaKnown RBP7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 RPL31P62899 125 aaKnown RBP7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 ZNF273Q14593 569 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 TAF13Q15543 124 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 LRRC23Q53EV4 343 aaPredicted RBP7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 AGBL2Q5U5Z8 902 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 OR2W3Q7Z3T1 314 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 C11orf42Q8N5U0 333 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 OR2T27Q8NH04 317 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 NDNFQ8TB73 568 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 MALSU1Q96EH3 234 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 FAM46AQ96IP4 442 aaKnown RBP7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 HSH2DQ96JZ2 352 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 PRRC1Q96M27 445 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 CGREF1Q99674 301 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 MICU1Q9BPX6 476 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 FNDC11Q9BVV2 318 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 POLR2J2Q9GZM3 115 aaKnown RBP7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 NDEL1Q9GZM8 345 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 DNTTIP1Q9H147 329 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 POLR2J3Q9H1A7 115 aaKnown RBP7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 ZMAT4Q9H898 229 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 RPRD1BQ9NQG5 326 aaKnown RBP7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 CENPMQ9NSP4 180 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 USE1Q9NZ43 259 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 B9D1Q9UPM9 204 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 SMAD5-AS1Q9Y6J3 95 aa7.11□□□□□ -1.27
SNRPA1-208ENST00000559686 A0A087WUU8 490 aa7.1□□□□□ -1.27
SNRPA1-208ENST00000559686 hCG_1809904A0A1W2PP81 198 aa7.1□□□□□ -1.27
SNRPA1-208ENST00000559686 A0A1W2PPE2 198 aa7.1□□□□□ -1.27
SNRPA1-208ENST00000559686 A0A1W2PPH5 198 aa7.1□□□□□ -1.27
SNRPA1-208ENST00000559686 A0A1W2PR64 198 aa7.1□□□□□ -1.27
SNRPA1-208ENST00000559686 A0A1W2PRV1 198 aa7.1□□□□□ -1.27
SNRPA1-208ENST00000559686 SEC14L6B5MCN3 397 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms