RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 FARS2O95363 451 aaKnown RBP3.55□□□□□ -1.84
SPG11-211ENST00000558561 RENP00797 406 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 IGHV3-13P01766 116 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 LCATP04180 440 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 ACSM4P0C7M7 580 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 EDN2P20800 178 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 USF1P22415 310 aaPredicted RBP3.55□□□□□ -1.84
SPG11-211ENST00000558561 SLC6A6P31641 620 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 RAD52P43351 418 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 HTR5AP47898 357 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 CRISP1P54107 249 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 SMIM11AP58511 58 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 ZP1P60852 638 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 SEC61A1P61619 476 aaKnown RBP3.55□□□□□ -1.84
SPG11-211ENST00000558561 LSM6P62312 80 aaKnown RBP3.55□□□□□ -1.84
SPG11-211ENST00000558561 RPP30P78346 268 aaKnown RBP3.55□□□□□ -1.84
SPG11-211ENST00000558561 EFNB1P98172 346 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 ZNF92Q03936 586 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 LOXL1Q08397 574 aaPredicted RBP3.55□□□□□ -1.84
SPG11-211ENST00000558561 COX10Q12887 443 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 MAB21L1Q13394 359 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 FLOT2Q14254 428 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 PTGES3Q15185 160 aaKnown RBP3.55□□□□□ -1.84
SPG11-211ENST00000558561 MPPED2Q15777 294 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 TBC1D28Q2M2D7 210 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 ZNF718Q3SXZ3 478 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 ANKDD1AQ495B1 522 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 KLHL12Q53G59 568 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 PLBD1Q6P4A8 553 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 LYPD2Q6UXB3 125 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 ZNF826PQ6ZT77 177 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 DPY19L4Q7Z388 723 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 DCXRQ7Z4W1 244 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 BIVMQ86UB2 503 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 C11orf53Q8IXP5 236 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 CADM3Q8N126 398 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 ARHGAP24Q8N264 748 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 CLDND2Q8NHS1 167 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 ITLN1Q8WWA0 313 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 TAF15Q92804 592 aaKnown RBP eCLIP3.55□□□□□ -1.84
SPG11-211ENST00000558561 TMEM18Q96B42 140 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 SGK3Q96BR1 496 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 HAVCR1Q96D42 359 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 SEH1LQ96EE3 360 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 NPFFR1Q9GZQ6 430 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 FGF23Q9GZV9 251 aaPredicted RBP3.55□□□□□ -1.84
SPG11-211ENST00000558561 RAB1BQ9H0U4 201 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 RBM38Q9H0Z9 239 aaKnown RBP3.55□□□□□ -1.84
SPG11-211ENST00000558561 KCNN2Q9H2S1 579 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 METTL17Q9H7H0 456 aaPredicted RBP3.55□□□□□ -1.84
SPG11-211ENST00000558561 LPAR2Q9HBW0 351 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 DYNLRB1Q9NP97 96 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 CENPMQ9NSP4 180 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 FAIMQ9NVQ4 179 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 NDE1Q9NXR1 346 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 TVP23BQ9NYZ1 205 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.55□□□□□ -1.84
SPG11-211ENST00000558561 DNAJB9Q9UBS3 223 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 KCNG2Q9UJ96 466 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 PURGQ9UJV8 347 aaKnown RBP3.55□□□□□ -1.84
SPG11-211ENST00000558561 FBXL3Q9UKT7 428 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 COPS3Q9UNS2 423 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 FKBP7Q9Y680 259 aa3.55□□□□□ -1.84
SPG11-211ENST00000558561 TANC2Q9HCD6 1990 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 MXRA5Q9NR99 2828 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 A0A1W2PPW3 197 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 LOC390937A0A1W2PQ73 354 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 A6NIN4 97 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 F5H5P2 479 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 H3BN98 237 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 TRAPPC2LH3BP13 241 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 H3BSH0 61 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 IFNL4K9M1U5 179 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 M0R233 179 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 PPIHO43447 177 aaKnown RBP3.54□□□□□ -1.84
SPG11-211ENST00000558561 TLX2O43763 284 aaPredicted RBP3.54□□□□□ -1.84
SPG11-211ENST00000558561 AHCYL1O43865 530 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 CD5LO43866 347 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 ENTPD5O75356 428 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 SNAP29O95721 258 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 CYB5R3P00387 301 aaPredicted RBP3.54□□□□□ -1.84
SPG11-211ENST00000558561 PNPP00491 289 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 TGFAP01135 160 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 MRPL3P09001 348 aaKnown RBP3.54□□□□□ -1.84
SPG11-211ENST00000558561 SPARCP09486 303 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 SBK2P0C263 348 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 SLC2A5P22732 501 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 IGFBP5P24593 272 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 GIFP27352 417 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 DCTDP32321 178 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 NAA10P41227 235 aaPredicted RBP3.54□□□□□ -1.84
SPG11-211ENST00000558561 CRYBB2P43320 205 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 GPR12P47775 334 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 RFX2P48378 723 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 EVX1P49640 407 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 ENTPD1P49961 510 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 PPOXP50336 477 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 PDLIM4P50479 330 aa3.54□□□□□ -1.84
SPG11-211ENST00000558561 KLF3P57682 345 aaPredicted RBP3.54□□□□□ -1.84
SPG11-211ENST00000558561 SNRPD2P62316 118 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms