RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 TEAD1P28347 426 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 ACAA2P42765 397 aaKnown RBP8.01□□□□□ -1.13
SYNE3-205ENST00000557275 HEATR5AQ86XA9 2040 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 SMPD2O60906 423 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 ZNF25P17030 456 aaPredicted RBP8.01□□□□□ -1.13
SYNE3-205ENST00000557275 MED25Q71SY5 747 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 ZC3H3Q8IXZ2 948 aaKnown RBP8.01□□□□□ -1.13
SYNE3-205ENST00000557275 ANKLE1Q8NAG6 615 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 TSACCQ96A04 125 aaPredicted RBP8.01□□□□□ -1.13
SYNE3-205ENST00000557275 DNAJA3Q96EY1 480 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 TECRQ9NZ01 308 aaKnown RBP8.01□□□□□ -1.13
SYNE3-205ENST00000557275 CHST8Q9H2A9 424 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 TMEM38BQ9NVV0 291 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 UQCR10Q9UDW1 63 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 DUSP13Q9UII6 198 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 PRSS38A1L453 326 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 LDB3O75112 727 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 OR2W3Q7Z3T1 314 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 C5orf17Q8NAS9 161 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 LAMB4A4D0S4 1761 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 A6NIN4 97 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 NAT2P11245 290 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 ELAVL1Q15717 326 aaKnown RBP8.01□□□□□ -1.13
SYNE3-205ENST00000557275 JMJD6Q6NYC1 403 aaPredicted RBP8.01□□□□□ -1.13
SYNE3-205ENST00000557275 FYTTD1Q96QD9 318 aaKnown RBP8.01□□□□□ -1.13
SYNE3-205ENST00000557275 TBX21Q9UL17 535 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 PRRX1P54821 245 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 TMEM81Q6P7N7 255 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 BEND2Q8NDZ0 799 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 SCN11AQ9UI33 1791 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 UTS2O95399 124 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 F7P08709 466 aaPredicted RBP8.01□□□□□ -1.13
SYNE3-205ENST00000557275 SHC1P29353 583 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 SPSB1Q96BD6 273 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 RGPD5Q99666 1765 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 MBTPS2O43462 519 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 SRP14P37108 136 aaKnown RBP8.01□□□□□ -1.13
SYNE3-205ENST00000557275 CDC34P49427 236 aaPredicted RBP8.01□□□□□ -1.13
SYNE3-205ENST00000557275 TBPL2Q6SJ96 375 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 RASL12Q9NYN1 266 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 TAAR3PQ9P1P4 343 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 RECKO95980 971 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 BTG2P78543 158 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 LEMD1Q68G75 181 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 NHLRC1Q6VVB1 395 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 PELI3Q8N2H9 469 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 SLC46A2Q9BY10 475 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 P2RY10O00398 339 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 CLDN12P56749 244 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 C19orf54Q5BKX5 351 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 TMEM136Q6ZRR5 245 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 TBC1D26Q86UD7 250 aa8.01□□□□□ -1.13
SYNE3-205ENST00000557275 TRAV34A0A0B4J273 112 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 M0R296 226 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 ZNF865P0CJ78 1059 aaPredicted RBP8□□□□□ -1.13
SYNE3-205ENST00000557275 IGSF11Q5DX21 431 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 OR52I2Q8NH67 350 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 PEAK1Q9H792 1746 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 LBX1P52954 281 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 GLDNQ6ZMI3 551 aaPredicted RBP8□□□□□ -1.13
SYNE3-205ENST00000557275 SELENBP1Q13228 472 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 SURF2Q15527 256 aaPredicted RBP8□□□□□ -1.13
SYNE3-205ENST00000557275 ZNF516Q92618 1163 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 MROH1Q8NDA8 1641 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 PRRG2O14669 202 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 MLF1P58340 268 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 RUNX3Q13761 415 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 SFTPA2Q8IWL1 248 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 SFTPA1Q8IWL2 248 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 KAZALD1Q96I82 304 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 HDAC8Q9BY41 377 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 FGFBP2Q9BYJ0 223 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 ZBTB32Q9Y2Y4 487 aaPredicted RBP8□□□□□ -1.13
SYNE3-205ENST00000557275 R4GMQ9 66 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 RBFOX2O43251 390 aaKnown RBP eCLIP8□□□□□ -1.131e-6■■■■□ 23.6
SYNE3-205ENST00000557275 SCRG1O75711 98 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 DHRS3O75911 302 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 SHBQ15464 509 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 NHSL2Q5HYW2 709 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 ZNF687Q8N1G0 1237 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 NUDCD2Q8WVJ2 157 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 DHRS4Q9BTZ2 278 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 C5AR2Q9P296 337 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 NDUFS8O00217 210 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 JAG1P78504 1218 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 KLRB1Q12918 225 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 CST5P28325 142 aaPredicted RBP8□□□□□ -1.13
SYNE3-205ENST00000557275 ID1P41134 155 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 GZMKP49863 264 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 SOCS7O14512 581 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 EFSO43281 561 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 TAL1P17542 331 aaPredicted RBP8□□□□□ -1.13
SYNE3-205ENST00000557275 ZNF273Q14593 569 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 OR10G8Q8NGN5 311 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 OR5M1Q8NGP8 315 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 APOBEC3DQ96AK3 386 aaPredicted RBP8□□□□□ -1.13
SYNE3-205ENST00000557275 GEMIN2O14893 280 aaKnown RBP8□□□□□ -1.13
SYNE3-205ENST00000557275 MNX1P50219 401 aaPredicted RBP8□□□□□ -1.13
SYNE3-205ENST00000557275 Q6ZSR6 202 aa8□□□□□ -1.13
SYNE3-205ENST00000557275 BVESQ8NE79 360 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms