RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 STEAP2Q8NFT2 490 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 OR4K15Q8NH41 348 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 CCDC107Q8WV48 283 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 PRRT1Q99946 306 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 HDHD3Q9BSH5 251 aaPredicted RBP8.8□□□□□ -1
TMEM260-211ENST00000556648 CRIM1Q9NZV1 1036 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 FXYD6-FXYD2A0A087WZ82 144 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 TRAV14DV4A0A0A6YYC5 116 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 SLC22A5O76082 557 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 SYNGR4O95473 234 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 HLA-AP01891 365 aaKnown RBP8.8□□□□□ -1
TMEM260-211ENST00000556648 HLA-HP01893 362 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 CCL2P13500 99 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 NAT1P18440 290 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 ZBTB25P24278 435 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 CD34P28906 385 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 BLVRBP30043 206 aaPredicted RBP8.8□□□□□ -1
TMEM260-211ENST00000556648 ALDH3B1P43353 468 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 ARFRP1Q13795 201 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 OPCMLQ14982 345 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 RNFT1Q5M7Z0 435 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 C11orf88Q6PI97 169 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 NUFIP2Q7Z417 695 aaKnown RBP8.8□□□□□ -1
TMEM260-211ENST00000556648 SLC25A42Q86VD7 318 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 MARCH1Q8TCQ1 289 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 ST8SIA4Q92187 359 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 URM1Q9BTM9 101 aaKnown RBP8.8□□□□□ -1
TMEM260-211ENST00000556648 FXYD6Q9H0Q3 95 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 DEFB127Q9H1M4 99 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 MYOZ1Q9NP98 299 aaPredicted RBP8.8□□□□□ -1
TMEM260-211ENST00000556648 PLEKHA6Q9Y2H5 1048 aa8.8□□□□□ -1
TMEM260-211ENST00000556648 FREM1Q5H8C1 2179 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 IGKV1D-8A0A087WSZ0 117 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 MCRIP1C9JLW8 97 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 LINC01387J3KSC0 135 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 ARPC5O15511 151 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 TMEM225BP0DP42 221 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 PPP3CBP16298 524 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 GABRR1P24046 479 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 MTCP1P56278 107 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 FAM3AP98173 230 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 SORDQ00796 357 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 PMP22Q01453 160 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 RIPPLY1Q0D2K3 151 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 C6orf201Q7Z4U5 140 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 BATF2Q8N1L9 274 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 FER1L6-AS2Q96M78 137 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 CITED4Q96RK1 184 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 MICU1Q9BPX6 476 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 ST6GALNAC5Q9BVH7 336 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 TM2D1Q9BX74 207 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 SPRR3Q9UBC9 169 aa8.79□□□□□ -1
TMEM260-211ENST00000556648 MCTS1Q9ULC4 181 aaKnown RBP8.79□□□□□ -1
TMEM260-211ENST00000556648 NOP16Q9Y3C1 178 aaKnown RBP8.79□□□□□ -1
TMEM260-211ENST00000556648 IGKV1-12A0A0C4DH73 117 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 L7N2F9 121 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 NOS1APO75052 506 aaPredicted RBP8.78□□□□□ -1
TMEM260-211ENST00000556648 HTR3BO95264 441 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 IGKV1D-12P01611 117 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 FTH1P19P0C7X4 201 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 AMY2BP19961 511 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 NPY4RP50391 375 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 PCBD1P61457 104 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 PNLIPRP3Q17RR3 467 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 NKAPLQ5M9Q1 402 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 TMEM42Q69YG0 159 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 SIGIRRQ6IA17 410 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 LYG2Q86SG7 212 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 HOGA1Q86XE5 327 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 OR8H3Q8N146 312 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 ZDHHC22Q8N966 263 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 OR13G1Q8NGZ3 307 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 CASTOR1Q8WTX7 329 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 DYRK2Q92630 601 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 C10orf35Q96D05 121 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 Q96M66 194 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 OCSTAMPQ9BR26 566 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 TMPRSS13Q9BYE2 586 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 PRRG4Q9BZD6 226 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 LINC00470Q9BZP3 86 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 PRR13Q9NZ81 148 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 KLF13Q9Y2Y9 288 aaPredicted RBP8.78□□□□□ -1
TMEM260-211ENST00000556648 ZNF407Q9C0G0 2248 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 PCNX2A6NKB5 2137 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 RPS10-NUDT3A0A1W2PQS6 291 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 C9orf170A2RU37 121 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 M0R233 179 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 SDCBPO00560 298 aaPredicted RBP8.78□□□□□ -1
TMEM260-211ENST00000556648 RGS11O94810 467 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 NRASP01111 189 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 IL2RAP01589 272 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 IFNA6P05013 189 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 AKR1C4P17516 323 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 WT1P19544 449 aaPredicted RBP8.78□□□□□ -1
TMEM260-211ENST00000556648 PI3P19957 117 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 TBPP20226 339 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 NFYAP23511 347 aaPredicted RBP8.78□□□□□ -1
TMEM260-211ENST00000556648 SEC61A1P61619 476 aaKnown RBP8.78□□□□□ -1
TMEM260-211ENST00000556648 BAMBIQ13145 260 aa8.78□□□□□ -1
TMEM260-211ENST00000556648 ZMYND11Q15326 602 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms