RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 ARPC3O15145 178 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 SERPINA1P01009 418 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 CFL1P23528 166 aaKnown RBP11.2□□□□□ -0.62
ACTN1-219ENST00000556432 HSD11B1P28845 292 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.2□□□□□ -0.62
ACTN1-219ENST00000556432 SEC23BQ15437 767 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 SNCBQ16143 134 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 DMRTC1Q5HYR2 192 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 LYPD4Q6UWN0 246 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 FAM57BQ71RH2 274 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 CSNK2A3Q8NEV1 391 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 OR4M1Q8NGD0 313 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 OR51L1Q8NGJ5 315 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 OR52J3Q8NH60 311 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 OR5K1Q8NHB7 308 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 STON2Q8WXE9 905 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 SGK3Q96BR1 496 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 YY1AP1Q9H869 796 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 SP140LQ9H930 580 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 BRD7Q9NPI1 651 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 ARGLU1Q9NWB6 273 aaPredicted RBP11.2□□□□□ -0.62
ACTN1-219ENST00000556432 USE1Q9NZ43 259 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 DNAJC27Q9NZQ0 273 aa11.2□□□□□ -0.62
ACTN1-219ENST00000556432 GMPR2Q9P2T1 348 aaKnown RBP11.2□□□□□ -0.62
ACTN1-219ENST00000556432 H3BUI4 141 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 RHBDL1O75783 438 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 PSG2P11465 335 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 PSKH1P11801 424 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 CCL3L1P16619 93 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 SLC15A1P46059 708 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 GRB2P62993 217 aaKnown RBP11.19□□□□□ -0.62
ACTN1-219ENST00000556432 PRDX4Q13162 271 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 DYNC1I2Q13409 638 aaKnown RBP11.19□□□□□ -0.62
ACTN1-219ENST00000556432 COQ5Q5HYK3 327 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 TCTEX1D4Q5JR98 221 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 TMEM200BQ69YZ2 307 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 UNQ9370/PRO34162Q6UXP9 181 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 CBLL1Q75N03 491 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 TIGD4Q8IY51 512 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 OR2T4Q8NH00 348 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 CAPSLQ8WWF8 208 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 FAM162AQ96A26 154 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 RNF170Q96K19 258 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 ZNF649Q9BS31 505 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 OR10A2Q9H208 303 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 C1orf21Q9H246 121 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 MPC1Q9Y5U8 109 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 COMMD3-BMI1R4GMX3 469 aa11.19□□□□□ -0.62
ACTN1-219ENST00000556432 FAM90A8PA6NJQ4 464 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 IDH3BO43837 385 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 DIRAS1O95057 198 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 ENTPD1P49961 510 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 GPM6AP51674 278 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 SLC25A1P53007 311 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 OR12D2P58182 307 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 SLC34A1Q06495 639 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 KRT72Q14CN4 511 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 MAPRE2Q15555 327 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 THAP5Q7Z6K1 395 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 LINC00482Q8N8I6 264 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 OR5P3Q8WZ94 311 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 PIGCQ92535 297 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 MALSU1Q96EH3 234 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 HIST1H2AAQ96QV6 131 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 ABCB9Q9NP78 766 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 TBL2Q9Y4P3 447 aaKnown RBP11.18□□□□□ -0.62
ACTN1-219ENST00000556432 LRP12Q9Y561 859 aa11.18□□□□□ -0.62
ACTN1-219ENST00000556432 BIRC6Q9NR09 4857 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 SLC1A7O00341 560 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 ZNF593O00488 134 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-219ENST00000556432 PIPP12273 146 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-219ENST00000556432 RHCEP18577 417 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 ZNF121P58317 390 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-219ENST00000556432 LIPEQ05469 1076 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 EIF2B1Q14232 305 aaKnown RBP11.17□□□□□ -0.62
ACTN1-219ENST00000556432 KLHL12Q53G59 568 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 METTL21CQ5VZV1 264 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 HDXQ7Z353 690 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 PIGWQ7Z7B1 504 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 ZDHHC23Q8IYP9 409 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 OR51D1Q8NGF3 324 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 OR52H1Q8NGJ2 320 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 OR13D1Q8NGV5 346 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 OR2T27Q8NH04 317 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 TFAP2CQ92754 450 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 PGAM5Q96HS1 289 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 MCRIP2Q9BUT9 160 aaKnown RBP11.17□□□□□ -0.62
ACTN1-219ENST00000556432 ZNF446Q9NWS9 450 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 NDUFAF4Q9P032 175 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.17□□□□□ -0.62
ACTN1-219ENST00000556432 ZMAT5Q9UDW3 170 aaKnown RBP11.17□□□□□ -0.62
ACTN1-219ENST00000556432 ZNF222Q9UK12 451 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 AP3M1Q9Y2T2 418 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 HILPDAQ9Y5L2 63 aa11.17□□□□□ -0.62
ACTN1-219ENST00000556432 DHRS12A0PJE2 317 aa11.16□□□□□ -0.62
ACTN1-219ENST00000556432 APOC1P02654 83 aa11.16□□□□□ -0.62
ACTN1-219ENST00000556432 JUNBP17275 347 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-219ENST00000556432 AZGP1P25311 298 aaKnown RBP11.16□□□□□ -0.62
ACTN1-219ENST00000556432 FMO3P31513 532 aa11.16□□□□□ -0.62
ACTN1-219ENST00000556432 DGCR2P98153 550 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms