RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 KCTD18Q6PI47 426 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-211ENST00000554310 DEGS2Q6QHC5 323 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 LRRN1Q6UXK5 716 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 GDPGP1Q6ZNW5 385 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 KRT77Q7Z794 578 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 ASB17Q8WXJ9 295 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 BORCS5Q969J3 196 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 SGK3Q96BR1 496 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 MNTQ99583 582 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 DCSTAMPQ9H295 470 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 FN3KRPQ9HA64 309 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 PALMDQ9NP74 551 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 C14orf119Q9NWQ9 140 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 CHCHD3Q9NX63 227 aaKnown RBP10.97□□□□□ -0.65
SHMT2-211ENST00000554310 H2AFY2Q9P0M6 372 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-211ENST00000554310 ZNF391Q9UJN7 358 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 LRP12Q9Y561 859 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 A3GALT2U3KPV4 340 aa10.97□□□□□ -0.65
SHMT2-211ENST00000554310 CEACAM18A8MTB9 384 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 PHF1O43189 567 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-211ENST00000554310 MRPL3P09001 348 aaKnown RBP10.96□□□□□ -0.65
SHMT2-211ENST00000554310 HSMCR30P0CW71 290 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 ETV1P50549 477 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 WNT4P56705 351 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 LCN2P80188 198 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 ROM1Q03395 351 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 OR8B8Q15620 311 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 SSX1Q16384 188 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 GFOD2Q3B7J2 385 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 ZNF404Q494X3 552 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 ESCO2Q56NI9 601 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 PRAMEF6Q5VXH4 476 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 FAHD2BQ6P2I3 314 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-211ENST00000554310 MEPCEQ7L2J0 689 aaKnown RBP10.96□□□□□ -0.65
SHMT2-211ENST00000554310 CSNK2A3Q8NEV1 391 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 S100ZQ8WXG8 99 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 FAHD2AQ96GK7 314 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 MROQ9BYG7 248 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 BRD7Q9NPI1 651 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 HAO2Q9NYQ3 351 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 CLEC2DQ9UHP7 191 aa10.96□□□□□ -0.65
SHMT2-211ENST00000554310 POLR3KQ9Y2Y1 108 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-211ENST00000554310 FBN1P35555 2871 aaKnown RBP10.96□□□□□ -0.66
SHMT2-211ENST00000554310 ACOD1A6NK06 481 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 PHYHO14832 338 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 ZNF254O75437 659 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 IGHA1P01876 353 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 RPS2P15880 293 aaKnown RBP10.95□□□□□ -0.66
SHMT2-211ENST00000554310 CPEP16870 476 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 DCTDP32321 178 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 RBMXP38159 391 aaKnown RBP10.95□□□□□ -0.66
SHMT2-211ENST00000554310 GNALP38405 381 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 PMELP40967 661 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 GSK3AP49840 483 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 BMXP51813 675 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 ZNF846Q147U1 533 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 MPPED2Q15777 294 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 RFLNBQ8N5W9 214 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 OR8B12Q8NGG6 310 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 OR8S1Q8NH09 359 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 TMEM158Q8WZ71 300 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 DVL3Q92997 716 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-211ENST00000554310 ITFG2Q969R8 447 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 OR8B4Q96RC9 309 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 MDFIQ99750 246 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 PAPOLGQ9BWT3 736 aaKnown RBP10.95□□□□□ -0.66
SHMT2-211ENST00000554310 TMPRSS13Q9BYE2 586 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 SLIRPQ9GZT3 109 aaKnown RBP10.95□□□□□ -0.66
SHMT2-211ENST00000554310 OR51E2Q9H255 320 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 ADGRL4Q9HBW9 690 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 TMEM165Q9HC07 324 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 ABCB9Q9NP78 766 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 UFSP2Q9NUQ7 469 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 NDUFB11Q9NX14 153 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 CCDC59Q9P031 241 aaKnown RBP10.95□□□□□ -0.66
SHMT2-211ENST00000554310 ZNF319Q9P2F9 582 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 RNF7Q9UBF6 113 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 MIOXQ9UGB7 285 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 OR5V1Q9UGF6 321 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 PPIAL4AQ9Y536 164 aa10.95□□□□□ -0.66
SHMT2-211ENST00000554310 ARHGAP32A7KAX9 2087 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 METTL15A6NJ78 407 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 ANXA2P2A6NMY6 339 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 LIMS3P0CW19 117 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 LIMS4P0CW20 117 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 ZFP36P26651 326 aaKnown RBP10.94□□□□□ -0.66
SHMT2-211ENST00000554310 RIDAP52758 137 aaKnown RBP10.94□□□□□ -0.66
SHMT2-211ENST00000554310 ACSM1Q08AH1 577 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 DOC2BQ14184 412 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 KCNJ8Q15842 424 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 DCDC5Q6ZRR9 648 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 NLRC3Q7RTR2 1065 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 C1QL2Q7Z5L3 287 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 SLC35F2Q8IXU6 374 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 ZNF679Q8IYX0 411 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 OR6Q1Q8NGQ2 317 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 NEIL1Q96FI4 390 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-211ENST00000554310 CHCHD6Q9BRQ6 235 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 TMEM246Q9BRR3 403 aa10.94□□□□□ -0.66
SHMT2-211ENST00000554310 SSBP3Q9BWW4 388 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms