RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-222	ENST00000553570	SLC7A6	Q92536	515 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	STMN2	Q93045	179 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	SLCO4A1	Q96BD0	722 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	ABHD1	Q96SE0	405 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	PITX2	Q99697	317 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	FOXC2	Q99958	501 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	SLC25A33	Q9BSK2	321 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	TMEM204	Q9BSN7	226 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	TRAF4	Q9BUZ4	470 aa	Predicted RBP	3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	PLA2G12A	Q9BZM1	189 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	OR2H1	Q9GZK4	316 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	RAB1B	Q9H0U4	201 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	TPK1	Q9H3S4	243 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	POLE4	Q9NR33	117 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	CA10	Q9NS85	328 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	PLEK2	Q9NYT0	353 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	TVP23B	Q9NYZ1	205 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	TAAR3P	Q9P1P4	343 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	KLHL21	Q9UJP4	597 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	FBXL3	Q9UKT7	428 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	UGT2A1	Q9Y4X1	527 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	ORC6	Q9Y5N6	252 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	CDH10	Q9Y6N8	788 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	TANC2	Q9HCD6	1990 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	ADGRG4	Q8IZF6	3080 aa		3.99	□□□□□ -1.77
ATXN3-222	ENST00000553570	hDV102S1	A0JD36	115 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	PLSCR5	A0PG75	271 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	TRIM64	A6NGJ6	449 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	ERICH4	A6NGS2	130 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	TRIM64B	A6NI03	449 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570		F5H5K5	113 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	LYNX1	G3V0Z9	82 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	DCTN6	O00399	190 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	ZNF593	O00488	134 aa	Predicted RBP	3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	RER1	O15258	196 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	TIMM8A	O60220	97 aa	Predicted RBP	3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	GPRIN2	O60269	458 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	CLPTM1	O96005	669 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	IGKV3-15	P01624	115 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	IGLV1-44	P01699	117 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	HMGN1	P05114	100 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	DANCR	P0C864	163 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	LYNX1	P0DP58	116 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	CLU	P10909	449 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	FCGR1A	P12314	374 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	ZNF35	P13682	527 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	MMP9	P14780	707 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	ZNF3	P17036	446 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	HOXB6	P17509	224 aa	Known RBP	3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	C21orf33	P30042	268 aa	Predicted RBP	3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	GLRX	P35754	106 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	RPS27	P42677	84 aa	Known RBP	3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	ALDH3B1	P43353	468 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	MAGEA2	P43356	314 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	DAP	P51397	102 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	CRISP1	P54107	249 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	FXYD6P3	P58550	94 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	ERVS71-1	P61550	626 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	PPP1CB	P62140	327 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	RPS23	P62266	143 aa	Known RBP	3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	SCRN3	Q0VDG4	424 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	CRMP1	Q14194	572 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	EIF2B1	Q14232	305 aa	Known RBP	3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	ENDOG	Q14249	297 aa	Known RBP	3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	MAD2L1BP	Q15013	274 aa	Predicted RBP	3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	C1QTNF12	Q5T7M4	302 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	SHE	Q5VZ18	495 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	ZNF770	Q6IQ21	691 aa	Predicted RBP	3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	ACSM5	Q6NUN0	579 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	ZNF544	Q6NX49	715 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	SLC27A4	Q6P1M0	643 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	PLBD1	Q6P4A8	553 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	SHQ1	Q6PI26	577 aa	Known RBP	3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	CLEC2A	Q6UVW9	174 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	UNQ6126/PRO20091	Q6UXV3	157 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	ZNF620	Q6ZNG0	422 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	ZNF771	Q7L3S4	317 aa	Predicted RBP	3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	KRT74	Q7RTS7	529 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	FAM122B	Q7Z309	247 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	ADCK1	Q86TW2	530 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	HIPK1	Q86Z02	1210 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	TGIF2LY	Q8IUE0	185 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	ERI1	Q8IV48	349 aa	Known RBP	3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	SLC37A3	Q8NCC5	494 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	NPEPL1	Q8NDH3	523 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	CSNK2A3	Q8NEV1	391 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	OR2AK2	Q8NG84	335 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	OR8D4	Q8NGM9	314 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	OR2T4	Q8NH00	348 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	OR4Q3	Q8NH05	313 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	OR1F12	Q8NHA8	337 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	SLC25A40	Q8TBP6	338 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	NABP1	Q96AH0	204 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	ORAI1	Q96D31	301 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	CMBL	Q96DG6	245 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	C4orf45	Q96LM5	186 aa		3.98	□□□□□ -1.77
ATXN3-222	ENST00000553570	DGCR6L	Q9BY27	220 aa		3.98	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms