RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 TRAV38-1A0A0B4J264 116 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 OOEPA6NGQ2 149 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 ACOD1A6NK06 481 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 SAC3D1A6NKF1 404 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 SNTNA6NMZ2 147 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 PRR32B1ATL7 298 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 NDUFA2O43678 99 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 CST4P01036 141 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 IGHV4-59P01825 116 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 SFTPBP07988 381 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 ACKR3P25106 362 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 ALDH3A2P51648 485 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 ROM1Q03395 351 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 KCNJ8Q15842 424 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 FAM76BQ5HYJ3 339 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 METTL11BQ5VVY1 283 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 SFRP4Q6FHJ7 346 aaPredicted RBP9.74□□□□□ -0.85
SRP54-203ENST00000553544 KCTD18Q6PI47 426 aaPredicted RBP9.74□□□□□ -0.85
SRP54-203ENST00000553544 Q6ZSV7 163 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 BCDIN3DQ7Z5W3 292 aaKnown RBP9.74□□□□□ -0.85
SRP54-203ENST00000553544 PQLC1Q8N2U9 271 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 GALNT4Q8N4A0 578 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 PNLDC1Q8NA58 520 aaKnown RBP9.74□□□□□ -0.85
SRP54-203ENST00000553544 OR1M1Q8NGA1 313 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 OR8B12Q8NGG6 310 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 OR8S1Q8NH09 359 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 EME1Q96AY2 570 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 ITPKCQ96DU7 683 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 GABARAPL3Q9BY60 117 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 TLNRD1Q9H1K6 362 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 RNPEPL1Q9HAU8 725 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 TRIM36Q9NQ86 728 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 USE1Q9NZ43 259 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 ERVK-18Q9QC07 812 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 ZNF391Q9UJN7 358 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 COPS3Q9UNS2 423 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 MPC1Q9Y5U8 109 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 TMEM14AQ9Y6G1 99 aa9.74□□□□□ -0.85
SRP54-203ENST00000553544 IGHV1-69DA0A0B4J2H0 117 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 A0A0U1RQV5 110 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 ZNF816-ZNF321PA0A0X1KG74 233 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 A6NLC8 198 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 C22orf46C9J442 243 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 ZNF254O75437 659 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 FCN3O75636 299 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 IGLV3-1P01715 115 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 IGHV1-69P01742 117 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 PRB2P02812 416 aaPredicted RBP9.73□□□□□ -0.85
SRP54-203ENST00000553544 OPN1MWP04001 364 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 MRPL3P09001 348 aaKnown RBP9.73□□□□□ -0.85
SRP54-203ENST00000553544 OPN1MW2P0DN77 364 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 OPN1MW3P0DN78 364 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 LOXL3P58215 753 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 SNCBQ16143 134 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 GFOD2Q3B7J2 385 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 NXNL2Q5VZ03 156 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 WDR82Q6UXN9 313 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 MEPCEQ7L2J0 689 aaKnown RBP9.73□□□□□ -0.85
SRP54-203ENST00000553544 KRT77Q7Z794 578 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 FAM90A1Q86YD7 464 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 ZNF679Q8IYX0 411 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 TCEANCQ8N8B7 351 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 SCCPDHQ8NBX0 429 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 TMEM163Q8TC26 289 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 LHX4Q969G2 390 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 RFKQ969G6 155 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 ITFG2Q969R8 447 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 PPP1R14AQ96A00 147 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 RDH12Q96NR8 316 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 WDFY2Q96P53 400 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 OR8B4Q96RC9 309 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 TBX15Q96SF7 602 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 MYCBPQ99417 103 aaPredicted RBP9.73□□□□□ -0.85
SRP54-203ENST00000553544 MNTQ99583 582 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 CIB1Q99828 191 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 MROQ9BYG7 248 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 FGF23Q9GZV9 251 aaPredicted RBP9.73□□□□□ -0.85
SRP54-203ENST00000553544 RIBC2Q9H4K1 309 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 FAM206AQ9NX38 181 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 IMPAD1Q9NX62 359 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 HAO2Q9NYQ3 351 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 KAAG1Q9UBP8 84 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 FAM96BQ9Y3D0 163 aa9.73□□□□□ -0.85
SRP54-203ENST00000553544 NOTCH3Q9UM47 2321 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 TMEM269A0A1B0GVZ9 245 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 H3BNX3 289 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.72□□□□□ -0.85
SRP54-203ENST00000553544 M0R129 80 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 PSMD9O00233 223 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 SRSF10O75494 262 aaKnown RBP9.72□□□□□ -0.85
SRP54-203ENST00000553544 TSPAN9O75954 239 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 ALPLP05186 524 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 MMP9P14780 707 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 MUC1P15941 1255 aaPredicted RBP9.72□□□□□ -0.85
SRP54-203ENST00000553544 POLR2IP36954 125 aaKnown RBP9.72□□□□□ -0.85
SRP54-203ENST00000553544 TGFBR2P37173 567 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 CSNK2BP67870 215 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 IL5RAQ01344 420 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 POU4F2Q12837 409 aa9.72□□□□□ -0.85
SRP54-203ENST00000553544 PRDX4Q13162 271 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms