RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 IQCF6A8MYZ5 107 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 UBBP0CG47 229 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 VSIG8P0DPA2 414 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 NAT2P11245 290 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 RAB6AP20340 208 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 NR4A2P43354 598 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 UQCRFS1P47985 274 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 CEACAM21Q3KPI0 293 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 ZNF718Q3SXZ3 478 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 C4orf17Q53FE4 359 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 OR10K2Q6IF99 312 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 TMEM108Q6UXF1 575 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 TNFAIP8L1Q8WVP5 186 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 ABCB10Q9NRK6 738 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 GHRLQ9UBU3 117 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 FBLN5Q9UBX5 448 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 RAB22AQ9UL26 194 aa26.09■■□□□ 1.77
CCM2-219ENST00000544363 ZP1P60852 638 aa26.08■■□□□ 1.77
CCM2-219ENST00000544363 ZNF181Q2M3W8 571 aa26.08■■□□□ 1.77
CCM2-219ENST00000544363 MBNL2Q5VZF2 373 aaKnown RBP26.08■■□□□ 1.77
CCM2-219ENST00000544363 PYHIN1Q6K0P9 492 aa26.08■■□□□ 1.77
CCM2-219ENST00000544363 HPSE2Q8WWQ2 592 aa26.08■■□□□ 1.77
CCM2-219ENST00000544363 LRRC46Q96FV0 321 aa26.08■■□□□ 1.77
CCM2-219ENST00000544363 RABL2AQ9UBK7 228 aaPredicted RBP26.08■■□□□ 1.77
CCM2-219ENST00000544363 RABL2BQ9UNT1 228 aa26.08■■□□□ 1.77
CCM2-219ENST00000544363 CTAG2O75638 210 aa26.07■■□□□ 1.76
CCM2-219ENST00000544363 PTAFRP25105 342 aa26.07■■□□□ 1.76
CCM2-219ENST00000544363 MMP15P51511 669 aa26.07■■□□□ 1.76
CCM2-219ENST00000544363 SNTB2Q13425 540 aaKnown RBP26.07■■□□□ 1.76
CCM2-219ENST00000544363 OR2W3Q7Z3T1 314 aa26.07■■□□□ 1.76
CCM2-219ENST00000544363 HIST1H2AAQ96QV6 131 aa26.07■■□□□ 1.76
CCM2-219ENST00000544363 TMEM14DPA8MWL7 114 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 CDK2P24941 298 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 GCH1P30793 250 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 NKX6-1P78426 367 aaPredicted RBP26.06■■□□□ 1.76
CCM2-219ENST00000544363 UNC119Q13432 240 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 CDSNQ15517 529 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 RGS7BPQ6MZT1 257 aaPredicted RBP26.06■■□□□ 1.76
CCM2-219ENST00000544363 C1QL2Q7Z5L3 287 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 BIVMQ86UB2 503 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 OR8H2Q8N162 312 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 OR5A2Q8NGI9 324 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 ITPKCQ96DU7 683 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 ABHD1Q96SE0 405 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 KCNJ16Q9NPI9 418 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 PURGQ9UJV8 347 aaKnown RBP26.06■■□□□ 1.76
CCM2-219ENST00000544363 ING4Q9UNL4 249 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 PQLC2LA1A4F0 135 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 KITLGP21583 273 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 CA6P23280 308 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 GLRXP35754 106 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 BAK1Q16611 211 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 ALKBH6Q3KRA9 238 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 TMEM255AQ5JRV8 349 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 IZUMO1Q8IYV9 350 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 OR5P3Q8WZ94 311 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 S100A13Q99584 98 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 FGF23Q9GZV9 251 aaPredicted RBP26.06■■□□□ 1.76
CCM2-219ENST00000544363 ATG5Q9H1Y0 275 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 C14orf119Q9NWQ9 140 aa26.06■■□□□ 1.76
CCM2-219ENST00000544363 MRPS7Q9Y2R9 242 aaKnown RBP26.06■■□□□ 1.76
CCM2-219ENST00000544363 ATP6V1G2-DDX39BF2Z307 99 aa26.05■■□□□ 1.76
CCM2-219ENST00000544363 FABP6P51161 128 aa26.05■■□□□ 1.76
CCM2-219ENST00000544363 PITPNAQ00169 270 aa26.05■■□□□ 1.76
CCM2-219ENST00000544363 TMEM69Q5SWH9 247 aa26.05■■□□□ 1.76
CCM2-219ENST00000544363 Q8N402 240 aa26.05■■□□□ 1.76
CCM2-219ENST00000544363 KCNG3Q8TAE7 436 aa26.05■■□□□ 1.76
CCM2-219ENST00000544363 DVL3Q92997 716 aaPredicted RBP26.05■■□□□ 1.76
CCM2-219ENST00000544363 NGBQ9NPG2 151 aa26.05■■□□□ 1.76
CCM2-219ENST00000544363 DIABLOQ9NR28 239 aa26.05■■□□□ 1.76
CCM2-219ENST00000544363 KALRNO60229 2985 aa26.04■■□□□ 1.76
CCM2-219ENST00000544363 XRCC3O43542 346 aa26.04■■□□□ 1.76
CCM2-219ENST00000544363 TMEM225BP0DP42 221 aa26.04■■□□□ 1.76
CCM2-219ENST00000544363 RADILQ96JH8 1075 aa26.04■■□□□ 1.76
CCM2-219ENST00000544363 IGSF10Q6WRI0 2623 aa26.04■■□□□ 1.76
CCM2-219ENST00000544363 DPRXA6NFQ7 191 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 MNDAP41218 407 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 GPM6AP51674 278 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 SLC22A6Q4U2R8 563 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 LYSMD2Q8IV50 215 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 FAM46BQ96A09 425 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 PHF21AQ96BD5 680 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 RNF170Q96K19 258 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 BBC3Q96PG8 261 aaPredicted RBP26.03■■□□□ 1.76
CCM2-219ENST00000544363 FZR1Q9UM11 496 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 TPPPO94811 219 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 CSF3P09919 207 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 IL7P13232 177 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 PTH2RP49190 550 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 STEAP3Q658P3 488 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 OR8G5Q8NG78 346 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 CST11Q9H112 138 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 NDRG3Q9UGV2 375 aa26.03■■□□□ 1.76
CCM2-219ENST00000544363 METTL21EPA6NDL7 271 aa26.02■■□□□ 1.76
CCM2-219ENST00000544363 ZNF732B4DXR9 585 aa26.02■■□□□ 1.76
CCM2-219ENST00000544363 SPRY1O43609 319 aaPredicted RBP26.02■■□□□ 1.76
CCM2-219ENST00000544363 KDM4BO94953 1096 aa26.02■■□□□ 1.76
CCM2-219ENST00000544363 RPS23P62266 143 aaKnown RBP26.02■■□□□ 1.76
CCM2-219ENST00000544363 SORDQ00796 357 aa26.02■■□□□ 1.76
CCM2-219ENST00000544363 PDZK1IP1Q13113 114 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms