RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 TRAPPC6BQ86SZ2 158 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 OR51T1Q8NGJ9 327 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 OR52B4Q8NGK2 314 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 GIMAP1Q8WWP7 306 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 HS3ST6Q96QI5 342 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 MICU1Q9BPX6 476 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 FZR1Q9UM11 496 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 ZNF175Q9Y473 711 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 FAM215AQ9Y5M1 114 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 TNFSF13O75888 250 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 MGMTP16455 207 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 SELEP16581 610 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 TBR1Q16650 682 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 ALKBH6Q3KRA9 238 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 SLC30A7Q8NEW0 376 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 GPX8Q8TED1 209 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 PP6455Q8WZ26 134 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 CREB3L1Q96BA8 519 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 SEC22CQ9BRL7 303 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 BOLA1Q9Y3E2 137 aa11.81□□□□□ -0.52
HCFC2-202ENST00000544223 METTL21EPA6NDL7 271 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 F8VVB4 439 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 F8VWA3 439 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 MKRN2OSH3BPM6 223 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 SSX5O60225 188 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 SFTPBP07988 381 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 RAD52P43351 418 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 GPM6AP51674 278 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 PIGYQ3MUY2 71 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 OR2T2Q6IF00 324 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 C6orf201Q7Z4U5 140 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 CXorf67Q86X51 503 aaPredicted RBP11.8□□□□□ -0.52
HCFC2-202ENST00000544223 OR10R2Q8NGX6 335 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 ZNF75AQ96N20 296 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 HDHD3Q9BSH5 251 aaPredicted RBP11.8□□□□□ -0.52
HCFC2-202ENST00000544223 CHST6Q9GZX3 395 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 SVEP1Q4LDE5 3571 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 TACC2O95359 2948 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 HTR3BO95264 441 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 H2AFB2P0C5Z0 115 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 PRF1P14222 555 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 CXCL3P19876 107 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 NPBWR2P48146 333 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 SCAND1P57086 179 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 PLP2Q04941 152 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 GUSBP1Q15486 140 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 ST3GAL2Q16842 350 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 NKAPLQ5M9Q1 402 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 ZNF782Q6ZMW2 699 aaPredicted RBP11.8□□□□□ -0.52
HCFC2-202ENST00000544223 C17orf107Q6ZR85 190 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 COLCA1Q6ZS62 124 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 Q8NA96 180 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 STARD4Q96DR4 205 aa11.8□□□□□ -0.52
HCFC2-202ENST00000544223 PLCE1Q9P212 2302 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 FAM221AA4D161 298 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 OR6C65A6NJZ3 312 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 PYCARD-AS1I3L0S3 204 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 ZNF205O95201 554 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 PTGER4P35408 488 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 APLNRP35414 380 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 GMFBP60983 142 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 DYRK1AQ13627 763 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 FCN2Q15485 313 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 TAF9Q16594 264 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 SCGB2B2Q4G0G5 96 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 DNM1P46Q6ZS02 220 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 GABRG1Q8N1C3 465 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 PNLDC1Q8NA58 520 aaKnown RBP11.79□□□□□ -0.52
HCFC2-202ENST00000544223 CAPSLQ8WWF8 208 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 AQP3Q92482 292 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 ITPKCQ96DU7 683 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 BORCS8Q96FH0 119 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 IL36RNQ9UBH0 155 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 TINAGQ9UJW2 476 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 ASH1LQ9NR48 2969 aaKnown RBP11.79□□□□□ -0.52
HCFC2-202ENST00000544223 LPLP06858 475 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 PSMB1P20618 241 aaKnown RBP11.79□□□□□ -0.52
HCFC2-202ENST00000544223 ZP1P60852 638 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 CXADRP78310 365 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 GABRA6Q16445 453 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 NRN1LQ496H8 165 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 CLVS2Q5SYC1 327 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 Q6ZT83 130 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 MRPL21Q7Z2W9 205 aaKnown RBP11.79□□□□□ -0.52
HCFC2-202ENST00000544223 RAB3CQ96E17 227 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 WDR89Q96FK6 387 aaPredicted RBP11.79□□□□□ -0.52
HCFC2-202ENST00000544223 ZNF488Q96MN9 340 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 S100A13Q99584 98 aa11.79□□□□□ -0.52
HCFC2-202ENST00000544223 REPIN1Q9BWE0 567 aaKnown RBP11.79□□□□□ -0.52
HCFC2-202ENST00000544223 ARID1AO14497 2285 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 BLVRBP30043 206 aaPredicted RBP11.78□□□□□ -0.52
HCFC2-202ENST00000544223 ARR3P36575 388 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 UBE2NP61088 152 aaKnown RBP11.78□□□□□ -0.52
HCFC2-202ENST00000544223 OR8B8Q15620 311 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 STEAP1BQ6NZ63 245 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 TMEM53Q6P2H8 277 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 C5orf24Q7Z6I8 188 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 KCNG3Q8TAE7 436 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 WBP1Q96G27 269 aa11.78□□□□□ -0.52
HCFC2-202ENST00000544223 GINS4Q9BRT9 223 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms