RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 PAX2Q02962 417 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 KCTD8Q6ZWB6 473 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 DOK3Q7L591 496 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 FAM220AQ7Z4H9 259 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 KCTD20Q7Z5Y7 419 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 FAM90A1Q86YD7 464 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 RDH10Q8IZV5 341 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 DHRSXQ8N5I4 330 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 OR52I1Q8NGK6 324 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 OR2G2Q8NGZ5 317 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 PELI1Q96FA3 418 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 C4orf36Q96KX1 117 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 SSBP3Q9BWW4 388 aaPredicted RBP15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 GPR173Q9NS66 373 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 OPN4Q9UHM6 478 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 LRCH1Q9Y2L9 728 aa15.26■□□□□ 0.03
SNRPA1-203ENST00000540017 FBN1P35555 2871 aaKnown RBP15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 LOC105371242A0A075B767 164 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 PPIAL4CA0A0B4J2A2 164 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 A0A0G2JMP0 313 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 A0A0X1KG70 313 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 TMEM210A6NLX4 147 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 ZNF732B4DXR9 585 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 J3QLW9 94 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 FCN3O75636 299 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 NRASP01111 189 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 GYPAP02724 150 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 GNAO1P09471 354 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 ZNF19P17023 458 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 RAB40BQ12829 278 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 GALEQ14376 348 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 TEX36Q5VZQ5 186 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 TTC23Q5W5X9 447 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 PLCXD3Q63HM9 321 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 OR4M2Q8NGB6 313 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 OR5A2Q8NGI9 324 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 HIST1H2AAQ96QV6 131 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 ALG8Q9BVK2 526 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 WDR13Q9H1Z4 485 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 OR51I2Q9H344 312 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 ISG20L2Q9H9L3 353 aaKnown RBP15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 ERVK13-1Q9NX77 482 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 FRRS1LQ9P0K9 344 aa15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 RPL36Q9Y3U8 105 aaKnown RBP15.25■□□□□ 0.03
SNRPA1-203ENST00000540017 WNK2Q9Y3S1 2297 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 TRAV38-1A0A0B4J264 116 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 SRRM5B3KS81 715 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 SYT7O43581 403 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 RHBDL1O75783 438 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 FADS2O95864 444 aaKnown RBP15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 ADRA2CP18825 462 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 CPT2P23786 658 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 SRP14P37108 136 aaKnown RBP15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 PITPNBP48739 271 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 GMFBP60983 142 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 GNB2P62879 340 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 GNG3P63215 75 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 CLVS2Q5SYC1 327 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 FDX2Q6P4F2 183 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 OR8B3Q8NGG8 313 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 NRG4Q8WWG1 115 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 DACT3Q96B18 629 aaPredicted RBP15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 OR8B2Q96RD0 313 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 ADI1Q9BV57 179 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 RASSF4Q9H2L5 321 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 INSIG2Q9Y5U4 225 aa15.24■□□□□ 0.03
SNRPA1-203ENST00000540017 A0A1B0GVI7 797 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 A0A1B0GW55 424 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 LOC107986453A0A1B0GWG9 222 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 DHRS7CA6NNS2 312 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 J3QLI3 93 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 AKR7A2O43488 359 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 ADAM20O43506 726 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 DUX4L2P0CJ85 424 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 DUX4L3P0CJ86 424 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 DUX4L4P0CJ87 422 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 DUX4L5P0CJ88 424 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 DUX4L6P0CJ89 424 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 DUX4L7P0CJ90 424 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 ZNF12P17014 697 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 GATA3P23771 443 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 CAPGP40121 348 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 ACTA2P62736 377 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 ACTG2P63267 376 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 WDR25Q64LD2 544 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 DUX4L9Q6RFH8 374 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 NLRC3Q7RTR2 1065 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 OR10Z1Q8NGY1 313 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 C7orf69Q9H7B7 122 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 SMURF1Q9HCE7 757 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 FGF20Q9NP95 211 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 DUX4Q9UBX2 424 aa15.23■□□□□ 0.03
SNRPA1-203ENST00000540017 PQLC2LA1A4F0 135 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 OR5B21A6NL26 309 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 E9PI62 339 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 IFNA2P01563 188 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 TFF1P04155 84 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 HTR1AP08908 422 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 LIMS3P0CW19 117 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 LIMS4P0CW20 117 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms