RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	PSMD9	O00233	223 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	CDIPT	O14735	213 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	NOS1AP	O75052	506 aa	Predicted RBP	10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ZNF205	O95201	554 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	CD80	P33681	288 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	MRPL28	Q13084	256 aa	Known RBP	10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	CDON	Q4KMG0	1287 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	CLVS2	Q5SYC1	327 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	LYPD2	Q6UXB3	125 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ZNF826P	Q6ZT77	177 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	CATSPERD	Q86XM0	798 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	YIPF7	Q8N8F6	280 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	PNLDC1	Q8NA58	520 aa	Known RBP	10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	SCCPDH	Q8NBX0	429 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	OR14K1	Q8NGZ2	314 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	RHOXF1	Q8NHV9	184 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	LRRC29	Q8WV35	223 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	STMN2	Q93045	179 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	NUDT16L1	Q9BRJ7	211 aa	Known RBP	10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	OR51I2	Q9H344	312 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	INPP5E	Q9NRR6	644 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	RASL12	Q9NYN1	266 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	GMPPB	Q9Y5P6	360 aa		10.24	□□□□□ -0.77
CLTCL1-205	ENST00000538828	LOC100130705	A0A1B0GUX0	176 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	C3orf80	F5H4A9	247 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ADAM20	O43506	726 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ENTPD6	O75354	484 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	PLAT	P00750	562 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	NRAS	P01111	189 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	UBC	P0CG48	685 aa	Known RBP	10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	TGM4	P49221	684 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	CCR9	P51686	369 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ACTA2	P62736	377 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ACTG2	P63267	376 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	CSNK2B	P67870	215 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	MFGE8	Q08431	387 aa	Predicted RBP	10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	KRTAP24-1	Q3LI83	254 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ARMCX4	Q5H9R4	360 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	LPCAT4	Q643R3	524 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	STUM	Q69YW2	141 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	SFRP4	Q6FHJ7	346 aa	Predicted RBP	10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	SSX6	Q7RTT6	188 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	FAM220A	Q7Z4H9	259 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	COMMD2	Q86X83	199 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ZNF573	Q86YE8	665 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	PHC2	Q8IXK0	858 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ACBD7	Q8N6N7	88 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	PACRGL	Q8N7B6	248 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	OR10H4	Q8NGA5	316 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	RORB	Q92753	470 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	MED30	Q96HR3	178 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	SLC29A1	Q99808	456 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	OCEL1	Q9H607	264 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ZMAT3	Q9HA38	289 aa	Known RBP	10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	CTSZ	Q9UBR2	303 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	PIGL	Q9Y2B2	252 aa		10.23	□□□□□ -0.77
CLTCL1-205	ENST00000538828	FADS2	O95864	444 aa	Known RBP	10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ISG15	P05161	165 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	EGR1	P18146	543 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	MPZ	P25189	248 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	GPM6A	P51674	278 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	CAV3	P56539	151 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ZNF85	Q03923	595 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	RAB40B	Q12829	278 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	HNRNPA0	Q13151	305 aa	Known RBP	10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	TMEM244	Q5VVB8	128 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ZNF788	Q6ZQV5	615 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	SYS1	Q8N2H4	156 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	BPIFB2	Q8N4F0	458 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	C8orf46	Q8TAG6	207 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	AQP3	Q92482	292 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	UBE2F	Q969M7	185 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	RNFT2	Q96EX2	444 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	FAM71F1	Q96KD3	344 aa	Predicted RBP	10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	MBOAT4	Q96T53	435 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	JAM3	Q9BX67	310 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	FGF23	Q9GZV9	251 aa	Predicted RBP	10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	PRDM13	Q9H4Q3	707 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	FAM118A	Q9NWS6	357 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	SMPD3	Q9NY59	655 aa	Predicted RBP	10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828	POLDIP2	Q9Y2S7	368 aa		10.22	□□□□□ -0.77
CLTCL1-205	ENST00000538828		A0A1B0GVI7	797 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ZNF879	B4DU55	563 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ZNF732	B4DXR9	585 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	TRIM77	I1YAP6	450 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	P2RY10	O00398	339 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	DVL1	O14640	695 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	TMPRSS2	O15393	492 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	GATB	O75879	557 aa	Known RBP	10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	IGHA1	P01876	353 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	GYPA	P02724	150 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	FAH	P16930	419 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	RBMX	P38159	391 aa	Known RBP	10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	GALE	Q14376	348 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	ZIK1	Q3SY52	487 aa	Predicted RBP	10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	KLF17	Q5JT82	389 aa	Predicted RBP	10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	PLCXD3	Q63HM9	321 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	C1orf122	Q6ZSJ8	110 aa		10.21	□□□□□ -0.77
CLTCL1-205	ENST00000538828	KCTD8	Q6ZWB6	473 aa		10.21	□□□□□ -0.77

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