RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 ZNF319Q9P2F9 582 aa14.97□□□□□ -0.01
TNFRSF1A-209ENST00000536717 NUFIP1Q9UHK0 495 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-209ENST00000536717 ZNF391Q9UJN7 358 aa14.97□□□□□ -0.01
TNFRSF1A-209ENST00000536717 GMDSO60547 372 aa14.96□□□□□ -0.02
TNFRSF1A-209ENST00000536717 FSTL3O95633 263 aa14.96□□□□□ -0.02
TNFRSF1A-209ENST00000536717 HTR1AP08908 422 aa14.96□□□□□ -0.02
TNFRSF1A-209ENST00000536717 CFL1P23528 166 aaKnown RBP14.96□□□□□ -0.02
TNFRSF1A-209ENST00000536717 GATA3P23771 443 aa14.96□□□□□ -0.02
TNFRSF1A-209ENST00000536717 PSMB10P40306 273 aa14.96□□□□□ -0.02
TNFRSF1A-209ENST00000536717 FAM3AP98173 230 aa14.96□□□□□ -0.02
TNFRSF1A-209ENST00000536717 GFOD2Q3B7J2 385 aa14.96□□□□□ -0.02
TNFRSF1A-209ENST00000536717 REEP6Q96HR9 211 aa14.96□□□□□ -0.02
TNFRSF1A-209ENST00000536717 MND1Q9BWT6 205 aa14.96□□□□□ -0.02
TNFRSF1A-209ENST00000536717 UFSP2Q9NUQ7 469 aa14.96□□□□□ -0.02
TNFRSF1A-209ENST00000536717 NOP16Q9Y3C1 178 aaKnown RBP14.96□□□□□ -0.02
TNFRSF1A-209ENST00000536717 A0A0U1RQV5 110 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 LRRC30A6NM36 301 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 TRAPPC2LH3BP13 241 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 TCF21O43680 179 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 MT-ND2P03891 347 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 WNT2P09544 360 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 ADRA2CP18825 462 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 HOXA4Q00056 320 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 FDX2Q6P4F2 183 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 COMMD2Q86X83 199 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 CATSPERDQ86XM0 798 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 ELMOD2Q8IZ81 293 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 C1orf87Q8N0U7 546 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 NANOGP1Q8N7R0 232 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 OR2G2Q8NGZ5 317 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 GATAD2BQ8WXI9 593 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 TMEM246Q9BRR3 403 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 C7orf69Q9H7B7 122 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 OPN4Q9UHM6 478 aa14.95□□□□□ -0.02
TNFRSF1A-209ENST00000536717 hCG_38984A0A1B0GV85 526 aa14.94□□□□□ -0.02
TNFRSF1A-209ENST00000536717 MRPS14O60783 128 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1A-209ENST00000536717 DDOSTP39656 456 aa14.94□□□□□ -0.02
TNFRSF1A-209ENST00000536717 WNT4P56705 351 aa14.94□□□□□ -0.02
TNFRSF1A-209ENST00000536717 ZNF404Q494X3 552 aa14.94□□□□□ -0.02
TNFRSF1A-209ENST00000536717 C1QL2Q7Z5L3 287 aa14.94□□□□□ -0.02
TNFRSF1A-209ENST00000536717 KLBQ86Z14 1044 aa14.94□□□□□ -0.02
TNFRSF1A-209ENST00000536717 DEFB108BQ8NET1 73 aa14.94□□□□□ -0.02
TNFRSF1A-209ENST00000536717 TRIM36Q9NQ86 728 aa14.94□□□□□ -0.02
TNFRSF1A-209ENST00000536717 BABAM2Q9NXR7 383 aa14.94□□□□□ -0.02
TNFRSF1A-209ENST00000536717 PPIAL4AQ9Y536 164 aa14.94□□□□□ -0.02
TNFRSF1A-209ENST00000536717 TTRP02766 147 aa14.93□□□□□ -0.02
TNFRSF1A-209ENST00000536717 TGM4P49221 684 aa14.93□□□□□ -0.02
TNFRSF1A-209ENST00000536717 CCR9P51686 369 aa14.93□□□□□ -0.02
TNFRSF1A-209ENST00000536717 ALKBH1Q13686 389 aaKnown RBP14.93□□□□□ -0.02
TNFRSF1A-209ENST00000536717 KCTD21Q4G0X4 260 aa14.93□□□□□ -0.02
TNFRSF1A-209ENST00000536717 CCDC58Q4VC31 144 aa14.93□□□□□ -0.02
TNFRSF1A-209ENST00000536717 ESCO2Q56NI9 601 aa14.93□□□□□ -0.02
TNFRSF1A-209ENST00000536717 WDR38Q5JTN6 314 aa14.93□□□□□ -0.02
TNFRSF1A-209ENST00000536717 PRSS35Q8N3Z0 413 aa14.93□□□□□ -0.02
TNFRSF1A-209ENST00000536717 TEX29Q8N6K0 151 aa14.93□□□□□ -0.02
TNFRSF1A-209ENST00000536717 C19orf18Q8NEA5 215 aa14.93□□□□□ -0.02
TNFRSF1A-209ENST00000536717 OR11L1Q8NGX0 322 aa14.93□□□□□ -0.02
TNFRSF1A-209ENST00000536717 PPP1R14AQ96A00 147 aa14.93□□□□□ -0.02
TNFRSF1A-209ENST00000536717 OCEL1Q9H607 264 aa14.93□□□□□ -0.02
TNFRSF1A-209ENST00000536717 SLC22A13Q9Y226 551 aa14.93□□□□□ -0.02
TNFRSF1A-209ENST00000536717 ANK2Q01484 3957 aa14.93□□□□□ -0.02
TNFRSF1A-209ENST00000536717 TNFAIP8O95379 198 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 FSHBP01225 129 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 IRF2P14316 349 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 RPS2P15880 293 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 ZNF12P17014 697 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 EPHA1P21709 976 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 IRF3Q14653 427 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 RPL22L1Q6P5R6 122 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 SPERTQ8NA61 448 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 PLPP7Q8NBV4 271 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 OR51E1Q8TCB6 317 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 RNF166Q96A37 237 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 C19orf24Q9BVV8 132 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 SSBP3Q9BWW4 388 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 FN3KRPQ9HA64 309 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 GPR84Q9NQS5 396 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 FRRS1LQ9P0K9 344 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 MIOXQ9UGB7 285 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 INSIG2Q9Y5U4 225 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 ANKRD30BLA7E2S9 258 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 E9PI62 339 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 MTRF1O75570 445 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 UBCP0CG48 685 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 CPT2P23786 658 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 GSK3AP49840 483 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 GTF2A1P52655 376 aaPredicted RBP14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 TAS2R43P59537 309 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 NANOS3P60323 173 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 PAX2Q02962 417 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 ZNF154Q13106 437 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 SPHARQ15513 63 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 MED22Q15528 200 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 OR8B8Q15620 311 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 ODF4Q2M2E3 257 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 SVOPQ8N4V2 548 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 ZNF485Q8NCK3 441 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 NANPQ8TBE9 248 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 PPP1R3EQ9H7J1 279 aa14.92□□□□□ -0.02
TNFRSF1A-209ENST00000536717 RNF7Q9UBF6 113 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms