RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 A0A1W2PRV1 198 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 MEX3AA1L020 520 aaKnown RBP7.47□□□□□ -1.21
NEDD8-206ENST00000531430 ZNF878C9JN71 531 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 NME4O00746 187 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 RHBDL1O75783 438 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 ARG1P05089 322 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 PSG2P11465 335 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 PSKH1P11801 424 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 ENTPD1P49961 510 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 CAV3P56539 151 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 ZNF121P58317 390 aaPredicted RBP7.47□□□□□ -1.21
NEDD8-206ENST00000531430 KRTAP10-11P60412 298 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 GRB2P62993 217 aaKnown RBP7.47□□□□□ -1.21
NEDD8-206ENST00000531430 AANATQ16613 207 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 TMEM95Q3KNT9 176 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 DMRTC1Q5HYR2 192 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 TMEM200BQ69YZ2 307 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 CRIP3Q6Q6R5 217 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 LIAT1Q6ZQX7 453 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 ARPINQ7Z6K5 226 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 FTMTQ8N4E7 242 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 FAM86B1Q8N7N1 296 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 CSNK2A3Q8NEV1 391 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 WFDC9Q8NEX5 89 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 OR52L1Q8NGH7 329 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 OR10Z1Q8NGY1 313 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 ZNF671Q8TAW3 534 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 AJUBAQ96IF1 538 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 C1orf21Q9H246 121 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 C19orf12Q9NSK7 152 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 MRGBPQ9NV56 204 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 MPC1Q9Y5U8 109 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 hCG_38984A0A1B0GV85 526 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 DHRS12A0PJE2 317 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 ADARB2-AS1A8MUL3 147 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 ZNF732B4DXR9 585 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 E9PQ18 207 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 H3BUI4 141 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 APOC1P02654 83 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 H2BFMP0C1H6 154 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 PIPP12273 146 aaPredicted RBP7.46□□□□□ -1.22
NEDD8-206ENST00000531430 CCL3L1P16619 93 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 CFL1P23528 166 aaKnown RBP7.46□□□□□ -1.22
NEDD8-206ENST00000531430 OTX1P32242 354 aaPredicted RBP7.46□□□□□ -1.22
NEDD8-206ENST00000531430 GPM6AP51674 278 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 RPL31P62899 125 aaKnown RBP7.46□□□□□ -1.22
NEDD8-206ENST00000531430 SLC35A2P78381 396 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 SLC34A1Q06495 639 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 SNCBQ16143 134 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 CEP78Q5JTW2 689 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 MOB3CQ70IA8 216 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 ERI1Q8IV48 349 aaKnown RBP7.46□□□□□ -1.22
NEDD8-206ENST00000531430 BATF2Q8N1L9 274 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 DYNAPQ8N1N2 210 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 RNF148Q8N7C7 305 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 SLC37A3Q8NCC5 494 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 PAPD5Q8NDF8 572 aaKnown RBP7.46□□□□□ -1.22
NEDD8-206ENST00000531430 OR6N2Q8NGY6 317 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 FAM81AQ8TBF8 368 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 RPS4Y2Q8TD47 263 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 THEM6Q8WUY1 208 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 OR5P3Q8WZ94 311 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 DPF1Q92782 380 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 SPSB4Q96A44 273 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 MCUR1Q96AQ8 359 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 HOPXQ9BPY8 73 aaPredicted RBP7.46□□□□□ -1.22
NEDD8-206ENST00000531430 CHID1Q9BWS9 393 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 MUC13Q9H3R2 512 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 EFCAB1Q9HAE3 211 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 ZNF319Q9P2F9 582 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 PITPNC1Q9UKF7 332 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 TCF19Q9Y242 345 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 HILPDAQ9Y5L2 63 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 COMMD3-BMI1R4GMX3 469 aa7.46□□□□□ -1.22
NEDD8-206ENST00000531430 IGKV1D-17A0A075B6S4 117 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 A6NDX4 124 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 RFPL4AA6NLU0 287 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 TMEM210A6NLX4 147 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 RFPL4AL1F8VTS6 287 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 F2RL2O00254 374 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 CLIC3O95833 236 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 CLUP10909 449 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 COX4I1P13073 169 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 PRDX2P32119 198 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 CEBPDP49716 269 aaPredicted RBP7.45□□□□□ -1.22
NEDD8-206ENST00000531430 SLC25A1P53007 311 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 OR12D2P58182 307 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 MXRA7P84157 204 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 TSPAN31Q12999 210 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 KLHL12Q53G59 568 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 ZDHHC23Q8IYP9 409 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 OR52H1Q8NGJ2 320 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 RP9Q8TA86 221 aaKnown RBP7.45□□□□□ -1.22
NEDD8-206ENST00000531430 CAPSLQ8WWF8 208 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 PYURFQ96I23 114 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 C7orf34Q96L11 122 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 ZNF488Q96MN9 340 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 ABHD6Q9BV23 337 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 TSSK6Q9BXA6 273 aa7.45□□□□□ -1.22
NEDD8-206ENST00000531430 TLNRD1Q9H1K6 362 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms