RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 SNTNA6NMZ2 147 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 ZNF878C9JN71 531 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 TBX1O43435 398 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 DUX4L2P0CJ85 424 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 DUX4L3P0CJ86 424 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 DUX4L4P0CJ87 422 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 DUX4L5P0CJ88 424 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 DUX4L6P0CJ89 424 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 DUX4L7P0CJ90 424 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 CLUP10909 449 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 SLC15A1P46059 708 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 IER3P46695 156 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 GRB2P62993 217 aaKnown RBP10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 FAM3AP98173 230 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 MICBQ29980 383 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 CDONQ4KMG0 1287 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 DUX4L9Q6RFH8 374 aaPredicted RBP10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 SLC16A9Q7RTY1 509 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 LDLRAD3Q86YD5 345 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 PDZD9Q8IXQ8 264 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 ENTHD1Q8IYW4 607 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 FGFRL1Q8N441 504 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 SCCPDHQ8NBX0 429 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 LY6G5BQ8NDX9 201 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 LINC01006Q8NI28 216 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 TMEM163Q8TC26 289 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 LRRC29Q8WV35 223 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 Q96MT0 163 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 CCL13Q99616 98 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 SP140LQ9H930 580 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 CMC2Q9NRP2 79 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 DUX4Q9UBX2 424 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 BLOC1S6Q9UL45 172 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 RNF114Q9Y508 228 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 KPTNQ9Y664 436 aa10.56□□□□□ -0.72
TM9SF1-211ENST00000531406 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 M0QZ24 198 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 ANXA2P07355 339 aaKnown RBP10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 MUC1P15941 1255 aaPredicted RBP10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 NAA10P41227 235 aaPredicted RBP10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 CX3CR1P49238 355 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 BLVRAP53004 296 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 SNRPGP62308 76 aaKnown RBP10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 CSNK2BP67870 215 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 EIF2B1Q14232 305 aaKnown RBP10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 TIGD6Q17RP2 521 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 WDR38Q5JTN6 314 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 LINC01590Q5TEZ4 76 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 MEDAGQ5VYS4 303 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 WDR82Q6UXN9 313 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 PRSS45Q7RTY3 260 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 DPY19L4Q7Z388 723 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 VMO1Q7Z5L0 202 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 PIP4P2Q8N4L2 257 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 TCEANCQ8N8B7 351 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 OR1M1Q8NGA1 313 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 OR6K6Q8NGW6 343 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 REEP6Q96HR9 211 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 PPP1R3EQ9H7J1 279 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 CLN6Q9NWW5 311 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 RHBDD3Q9Y3P4 386 aa10.55□□□□□ -0.72
TM9SF1-211ENST00000531406 hCG_38984A0A1B0GV85 526 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 A0A1B0GVI7 797 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 PRR23D1E9PI22 279 aaPredicted RBP10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 TIMM23O14925 209 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 PRKYO43930 277 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 CLPXO76031 633 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 PRR23D2P0DMB1 279 aaPredicted RBP10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 GSK3AP49840 483 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 PROK1P58294 105 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 ISL1P61371 349 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 KLHL12Q53G59 568 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 ASPHD2Q6ICH7 369 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 FAM57BQ71RH2 274 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 SLC36A1Q7Z2H8 476 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 GID4Q8IVV7 300 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 FAM216BQ8N7L0 139 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 OR52H1Q8NGJ2 320 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 CNIH3Q8TBE1 160 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 RNF133Q8WVZ7 376 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 RFKQ969G6 155 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 SEH1LQ96EE3 360 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 DMRTB1Q96MA1 342 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 NR1H4Q96RI1 486 aaPredicted RBP10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 IL4I1Q96RQ9 567 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 ABHD6Q9BV23 337 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 DPAGT1Q9H3H5 408 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 H2AFY2Q9P0M6 372 aaPredicted RBP10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 ZNF319Q9P2F9 582 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 ONECUT1Q9UBC0 465 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 FAM96BQ9Y3D0 163 aa10.54□□□□□ -0.72
TM9SF1-211ENST00000531406 M0R129 80 aa10.53□□□□□ -0.72
TM9SF1-211ENST00000531406 CDIPTO14735 213 aa10.53□□□□□ -0.72
TM9SF1-211ENST00000531406 GPR37O15354 613 aa10.53□□□□□ -0.72
TM9SF1-211ENST00000531406 NDUFB3O43676 98 aa10.53□□□□□ -0.72
TM9SF1-211ENST00000531406 TNFAIP8O95379 198 aa10.53□□□□□ -0.72
TM9SF1-211ENST00000531406 APOC1P02654 83 aa10.53□□□□□ -0.72
TM9SF1-211ENST00000531406 AMY2BP19961 511 aa10.53□□□□□ -0.72
TM9SF1-211ENST00000531406 CFL1P23528 166 aaKnown RBP10.53□□□□□ -0.72
TM9SF1-211ENST00000531406 HSD11B1P28845 292 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms