RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	METTL8	Q9H825	291 aa	Known RBP	20.52	■□□□□ 0.88
GSDMD-208	ENST00000528475	ZNF629	Q9UEG4	869 aa	Predicted RBP	20.52	■□□□□ 0.88
GSDMD-208	ENST00000528475		U3KQA8	63 aa		20.52	■□□□□ 0.88
GSDMD-208	ENST00000528475	RRP8	O43159	456 aa	Known RBP	20.52	■□□□□ 0.87
GSDMD-208	ENST00000528475	APOC1	P02654	83 aa		20.52	■□□□□ 0.87
GSDMD-208	ENST00000528475	ADCYAP1	P18509	176 aa		20.52	■□□□□ 0.87
GSDMD-208	ENST00000528475	GLRA1	P23415	457 aa		20.52	■□□□□ 0.87
GSDMD-208	ENST00000528475	LOC102723996	A0A087X1L8	192 aa		20.51	■□□□□ 0.87
GSDMD-208	ENST00000528475	SDCBP	O00560	298 aa	Predicted RBP	20.51	■□□□□ 0.87
GSDMD-208	ENST00000528475	VAMP5	O95183	116 aa		20.51	■□□□□ 0.87
GSDMD-208	ENST00000528475	HTR3B	O95264	441 aa		20.51	■□□□□ 0.87
GSDMD-208	ENST00000528475	EPHA8	P29322	1005 aa	Predicted RBP	20.51	■□□□□ 0.87
GSDMD-208	ENST00000528475	FLI1	Q01543	452 aa	Predicted RBP	20.51	■□□□□ 0.87
GSDMD-208	ENST00000528475	PHYHD1	Q5SRE7	291 aa		20.51	■□□□□ 0.87
GSDMD-208	ENST00000528475	ZNF585A	Q6P3V2	769 aa		20.51	■□□□□ 0.87
GSDMD-208	ENST00000528475	PUSL1	Q8N0Z8	303 aa	Known RBP	20.51	■□□□□ 0.87
GSDMD-208	ENST00000528475	OR5D18	Q8NGL1	313 aa		20.51	■□□□□ 0.87
GSDMD-208	ENST00000528475	SHD	Q96IW2	340 aa		20.51	■□□□□ 0.87
GSDMD-208	ENST00000528475	CCDC74B	Q96LY2	380 aa		20.51	■□□□□ 0.87
GSDMD-208	ENST00000528475	PRR13	Q9NZ81	148 aa		20.51	■□□□□ 0.87
GSDMD-208	ENST00000528475	MEMO1	Q9Y316	297 aa		20.51	■□□□□ 0.87
GSDMD-208	ENST00000528475	NDUFA2	O43678	99 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	SIGLEC6	O43699	453 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	EIF1B	O60739	113 aa	Known RBP	20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	EIF5A	P63241	154 aa	Known RBP	20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	RAB32	Q13637	225 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	PCOLCE	Q15113	449 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	RSPO1	Q2MKA7	263 aa	Predicted RBP	20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	MST1L	Q2TV78	715 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	CHRFAM7A	Q494W8	412 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	PRAMEF20	Q5VT98	475 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	BHLHE23	Q8NDY6	225 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	ADAMTS17	Q8TE56	1095 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	SAT2	Q96F10	170 aa	Predicted RBP	20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	COLQ	Q9Y215	455 aa	Predicted RBP	20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	GPR31	O00270	319 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	TAAR5	O14804	337 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	MTRF1	O75570	445 aa	Known RBP	20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	SCRN3	Q0VDG4	424 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	TMEM123	Q8N131	208 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	S100A13	Q99584	98 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	WDR54	Q9H977	334 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	LPAR3	Q9UBY5	353 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	C14orf166	Q9Y224	244 aa	Known RBP	20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	PCDHGA1	Q9Y5H4	931 aa		20.5	■□□□□ 0.87
GSDMD-208	ENST00000528475	OR5H15	A6NDH6	313 aa		20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475		F5H5K5	113 aa		20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	FCGR2A	P12318	317 aa		20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	SERPINA2	P20848	420 aa		20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	PJVK	Q0ZLH3	352 aa		20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	ESX1	Q8N693	406 aa		20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	OR4A4P	Q8NGN8	299 aa		20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	NTNG2	Q96CW9	530 aa		20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	CNTNAP3B	Q96NU0	1288 aa		20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	NDRG3	Q9UGV2	375 aa		20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	DHH	O43323	396 aa		20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	CD63	P08962	238 aa		20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	FAH	P16930	419 aa		20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	SUCLG1	P53597	346 aa	Known RBP	20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	NPRL2	Q8WTW4	380 aa		20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	INTS12	Q96CB8	462 aa	Known RBP	20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	C1orf123	Q9NWV4	160 aa		20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	NXT1	Q9UKK6	140 aa	Known RBP	20.49	■□□□□ 0.87
GSDMD-208	ENST00000528475	GUCA2B	Q16661	112 aa		20.48	■□□□□ 0.87
GSDMD-208	ENST00000528475	OPN5	Q6U736	354 aa		20.48	■□□□□ 0.87
GSDMD-208	ENST00000528475	DTX1	Q86Y01	620 aa		20.48	■□□□□ 0.87
GSDMD-208	ENST00000528475	LDLRAD3	Q86YD5	345 aa		20.48	■□□□□ 0.87
GSDMD-208	ENST00000528475	OR51F2	Q8NH61	342 aa		20.48	■□□□□ 0.87
GSDMD-208	ENST00000528475	SMIM8	Q96KF7	97 aa		20.48	■□□□□ 0.87
GSDMD-208	ENST00000528475	NAA11	Q9BSU3	229 aa	Predicted RBP	20.48	■□□□□ 0.87
GSDMD-208	ENST00000528475	ANGPTL4	Q9BY76	406 aa		20.48	■□□□□ 0.87
GSDMD-208	ENST00000528475	DECR2	Q9NUI1	292 aa		20.48	■□□□□ 0.87
GSDMD-208	ENST00000528475	WNT16	Q9UBV4	365 aa		20.48	■□□□□ 0.87
GSDMD-208	ENST00000528475	PIGL	Q9Y2B2	252 aa		20.48	■□□□□ 0.87
GSDMD-208	ENST00000528475	PMS2P1	A4D2B8	440 aa		20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475		K7ESF4	209 aa		20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475	IFNA2	P01563	188 aa		20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475	PTGER4	P35408	488 aa		20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475	EIF5AL1	Q6IS14	154 aa	Known RBP	20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475	OR10Z1	Q8NGY1	313 aa		20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475	ZNF385A	Q96PM9	386 aa	Known RBP	20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475		M0R135	149 aa		20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475	AKR1C2	P52895	323 aa		20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475	DSCR4	P56555	118 aa	Predicted RBP	20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475	AKR1C1	Q04828	323 aa		20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475	OR9K2	Q8NGE7	335 aa		20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475	MAFIP	Q8WZ33	124 aa		20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475	ZNF799	Q96GE5	643 aa		20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475		Q96M66	194 aa		20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475	SEC11C	Q9BY50	192 aa		20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475	FOXD3	Q9UJU5	478 aa	Predicted RBP	20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475	PRELID3B	Q9Y3B1	194 aa		20.47	■□□□□ 0.87
GSDMD-208	ENST00000528475	DHRS7C	A6NNS2	312 aa		20.46	■□□□□ 0.87
GSDMD-208	ENST00000528475	ZNF705E	A8MWA4	302 aa	Predicted RBP	20.46	■□□□□ 0.87
GSDMD-208	ENST00000528475	NPIPA2	E9PIF3	369 aa		20.46	■□□□□ 0.87
GSDMD-208	ENST00000528475		F8W036	122 aa		20.46	■□□□□ 0.87
GSDMD-208	ENST00000528475	NPIPA3	F8WFD2	350 aa		20.46	■□□□□ 0.87
GSDMD-208	ENST00000528475	CTSD	P07339	412 aa	Predicted RBP	20.46	■□□□□ 0.87
GSDMD-208	ENST00000528475	BLOC1S1	P78537	153 aa		20.46	■□□□□ 0.87
GSDMD-208	ENST00000528475	DMRTC1	Q5HYR2	192 aa		20.46	■□□□□ 0.87

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms