RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 EBF4Q9BQW3 602 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 HES7Q9BYE0 225 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 FAM107BQ9H098 131 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 ILKAPQ9H0C8 392 aaPredicted RBP2.78□□□□□ -1.96
CD44-219ENST00000525685 GLIPR2Q9H4G4 154 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 REEP4Q9H6H4 257 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 MEAF6Q9HAF1 191 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 CXorf21Q9HAI6 301 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 C12orf10Q9HB07 376 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 SLCO1B3Q9NPD5 702 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 POLE3Q9NRF9 147 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 MRPL39Q9NYK5 338 aaKnown RBP2.78□□□□□ -1.96
CD44-219ENST00000525685 ZNF639Q9UID6 485 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 PSME2Q9UL46 239 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 CBY1Q9Y3M2 126 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 USH1CQ9Y6N9 552 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 KIF25-AS1Q9Y6Z4 181 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 FREM2Q5SZK8 3169 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 ZFHX4Q86UP3 3567 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 CHD8Q9HCK8 2581 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 SCN2AQ99250 2005 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 PTPRQQ9UMZ3 2332 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 BAHCC1Q9P281 2608 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 BSNQ9UPA5 3926 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 TRAV17A0A0B4J275 112 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 A0A0G2JMM0 328 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 GOLGA8QA0A0J9YX86 632 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 A0A1B0GWJ7 208 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 A0A1W2PPB8 328 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 A0A1W2PRS3 328 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 GOLGA8OA6NCC3 632 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 ZFP92A6NM28 416 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 TRPC5OSA6NMA1 111 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 KIR3DP1A8MWS1 328 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 C9JVG2 144 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 GOLGA8NF8WBI6 632 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 NDUFS8O00217 210 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 OR2J2O76002 312 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 PSMG1O95456 288 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 C6orf47O95873 294 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 ACTL6AO96019 429 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 AK1P00568 194 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 HSPB1P04792 205 aaKnown RBP2.77□□□□□ -1.97
CD44-219ENST00000525685 ALOX5P09917 674 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 P0C879 139 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 CCL3P10147 92 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 CLUP10909 449 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 ZNF19P17023 458 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 ZP3P21754 424 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 PRKACBP22694 351 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 CFL1P23528 166 aaKnown RBP2.77□□□□□ -1.97
CD44-219ENST00000525685 IL12AP29459 219 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 HPCAL1P37235 193 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 CYB561P49447 251 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 HLCSP50747 726 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 CDK9P50750 372 aaKnown RBP2.77□□□□□ -1.97
CD44-219ENST00000525685 SSR4P51571 173 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 NCBP2P52298 156 aaKnown RBP eCLIP2.77□□□□□ -1.97
CD44-219ENST00000525685 CLDN8P56748 225 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 POLR2GP62487 172 aaKnown RBP eCLIP2.77□□□□□ -1.97
CD44-219ENST00000525685 HTD2P86397 168 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 OC90Q02509 493 aaPredicted RBP2.77□□□□□ -1.97
CD44-219ENST00000525685 BIKQ13323 160 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 DYNC1I2Q13409 638 aaKnown RBP2.77□□□□□ -1.97
CD44-219ENST00000525685 COTL1Q14019 142 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 NNATQ16517 81 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 TRMT12Q53H54 448 aaKnown RBP2.77□□□□□ -1.97
CD44-219ENST00000525685 C9orf129Q5T035 196 aaKnown RBP2.77□□□□□ -1.97
CD44-219ENST00000525685 UFSP1Q6NVU6 142 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 CLEC2AQ6UVW9 174 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 NPSR1Q6W5P4 371 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 HSD17B13Q7Z5P4 300 aaPredicted RBP2.77□□□□□ -1.97
CD44-219ENST00000525685 TMEM17Q86X19 198 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 RIMKLAQ8IXN7 391 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 CYP4Z2PQ8N1L4 340 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 TMEM156Q8N614 296 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 KRTCAP2Q8N6L1 136 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 ZNF615Q8N8J6 731 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 OR7G1Q8NGA0 311 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 OR5L2Q8NGL0 311 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 ENKURQ8TC29 256 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 FGGYQ96C11 551 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 EFHD2Q96C19 240 aaPredicted RBP2.77□□□□□ -1.97
CD44-219ENST00000525685 C16orf74Q96GX8 76 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 AMDHD1Q96NU7 426 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 OR5B2Q96R09 309 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 OR52B2Q96RD2 323 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 SLC30A2Q9BRI3 323 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 UTP23Q9BRU9 249 aaKnown RBP2.77□□□□□ -1.97
CD44-219ENST00000525685 C19orf24Q9BVV8 132 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 ZNF416Q9BWM5 594 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 NXF5Q9H1B4 397 aaKnown RBP2.77□□□□□ -1.97
CD44-219ENST00000525685 WDR55Q9H6Y2 383 aaPredicted RBP2.77□□□□□ -1.97
CD44-219ENST00000525685 TRIM45Q9H8W5 580 aaPredicted RBP2.77□□□□□ -1.97
CD44-219ENST00000525685 GORASP2Q9H8Y8 452 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 WDR76Q9H967 626 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 ANKRA2Q9H9E1 313 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 FOLH1BQ9HBA9 442 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 C8orf4Q9NR00 106 aa2.77□□□□□ -1.97
CD44-219ENST00000525685 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms