RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 UGT2A1Q9Y4X1 527 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 IGHV1-45A0A0A0MS14 117 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 LANCL1O43813 399 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 CA11O75493 328 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 KRASP01116 189 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 FAHP16930 419 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 COL19A1Q14993 1142 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 CDK5R1Q15078 307 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 NFAM1Q8NET5 270 aaPredicted RBP3.78□□□□□ -1.8
VCAN-209ENST00000513016 FAM213BQ8TBF2 198 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 PFDN5Q99471 154 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 UQCC2Q9BRT2 126 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 CHODLQ9H9P2 273 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 DNAJB12Q9NXW2 375 aaKnown RBP3.78□□□□□ -1.8
VCAN-209ENST00000513016 ZDHHC8Q9ULC8 765 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 ZAR1LA6NP61 321 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 TMPRSS2O15393 492 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 PRKNO60260 465 aaPredicted RBP3.78□□□□□ -1.8
VCAN-209ENST00000513016 ALOX5APP20292 161 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 COX5AP20674 150 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 MRPS11P82912 194 aaKnown RBP3.78□□□□□ -1.8
VCAN-209ENST00000513016 OR2B11Q5JQS5 317 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 MOGAT3Q86VF5 341 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 FUNDC1Q8IVP5 155 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 CDH26Q8IXH8 852 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 TCTE3Q8IZS6 198 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 OR1L4Q8NGR5 311 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 OR1L1Q8NH94 360 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 NEU4Q8WWR8 484 aaPredicted RBP3.78□□□□□ -1.8
VCAN-209ENST00000513016 PLEKHA2Q9HB19 425 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 SLC35D1Q9NTN3 355 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 MTCH1Q9NZJ7 389 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 NPTNQ9Y639 398 aa3.78□□□□□ -1.8
VCAN-209ENST00000513016 OR2W5A6NFC9 320 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 C1orf196B1AJZ1 125 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 J3QT63 122 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 K7ESF4 209 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 IL5P05113 134 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 FAM87AP0C7U9 286 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 TGM1P22735 817 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 TESK1Q15569 626 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 ZNF260Q3ZCT1 412 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 TGIF2LYQ8IUE0 185 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 TGIF2LXQ8IUE1 241 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 BATF2Q8N1L9 274 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 BPIFCQ8NFQ6 507 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 OR4S2Q8NH73 311 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 ZNF519Q8TB69 540 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 EID2BQ96D98 161 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 C20orf24Q9BUV8 137 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 SUCNR1Q9BXA5 334 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 ANGPTL4Q9BY76 406 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 SAMD10Q9BYL1 202 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 SAV1Q9H4B6 383 aaPredicted RBP3.77□□□□□ -1.81
VCAN-209ENST00000513016 FGF20Q9NP95 211 aaPredicted RBP3.77□□□□□ -1.81
VCAN-209ENST00000513016 COA4Q9NYJ1 87 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 PSENENQ9NZ42 101 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 ZNF835Q9Y2P0 537 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 TNRC6CQ9HCJ0 1690 aaKnown RBP3.77□□□□□ -1.81
VCAN-209ENST00000513016 ZNF716A6NP11 495 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 SIAH2O43255 324 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 SPDEFO95238 335 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 PDGFBP01127 241 aaPredicted RBP3.77□□□□□ -1.81
VCAN-209ENST00000513016 FAM106CPP0CH98 169 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 GFRA1P56159 465 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 OR5I1Q13606 314 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 HYAL4Q2M3T9 481 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 CXorf67Q86X51 503 aaPredicted RBP3.77□□□□□ -1.81
VCAN-209ENST00000513016 WDR31Q8NA23 367 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 PDCD1LG2Q9BQ51 273 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 SCNM1Q9BWG6 230 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 TGIF2Q9GZN2 237 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 SLC52A3Q9NQ40 469 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 OOEPA6NGQ2 149 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 LIPT2A6NK58 231 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 C3orf80F5H4A9 247 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 OR2B8PP59922 312 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 ZBTB37Q5TC79 503 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 LAMTOR1Q6IAA8 161 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 LYPD4Q6UWN0 246 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 BHLHA9Q7RTU4 235 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 CALHM3Q86XJ0 350 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 MITD1Q8WV92 249 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 SMIM19Q96E16 107 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 MISP3Q96FF7 219 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 SIRT5Q9NXA8 310 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 PURGQ9UJV8 347 aaKnown RBP3.77□□□□□ -1.81
VCAN-209ENST00000513016 LRP12Q9Y561 859 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 CACNA1SQ13698 1873 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 RNASEK-C17orf49H0YIS7 233 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 M0QYG6 137 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 SULT1A3P0DMM9 295 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 SULT1A4P0DMN0 295 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 TAGLNQ01995 201 aaKnown RBP3.77□□□□□ -1.81
VCAN-209ENST00000513016 C3AR1Q16581 482 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 TMEM268Q5VZI3 342 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 Q6ZPB1 254 aaPredicted RBP3.77□□□□□ -1.81
VCAN-209ENST00000513016 ZNF547Q8IVP9 402 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 OR4D10Q8NGI6 311 aa3.77□□□□□ -1.81
VCAN-209ENST00000513016 C10orf90Q96M02 699 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms