RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 IRF2P14316 349 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 ZNF19P17023 458 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 CCL1P22362 96 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 IL5RAQ01344 420 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 FAM76BQ5HYJ3 339 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 DCAF12L2Q5VW00 463 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 XAF1Q6GPH4 301 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 KCTD8Q6ZWB6 473 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 MUC20Q8N307 709 aaPredicted RBP11.29□□□□□ -0.6
SNF8-206ENST00000509989 SPERTQ8NA61 448 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 OR2G2Q8NGZ5 317 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 PELI1Q96FA3 418 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 NEIL1Q96FI4 390 aaPredicted RBP11.29□□□□□ -0.6
SNF8-206ENST00000509989 C4orf36Q96KX1 117 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 CCL13Q99616 98 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 MICU1Q9BPX6 476 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 RTL8AQ9BWD3 113 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 OR51I2Q9H344 312 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 COL6A5A8TX70 2615 aa11.29□□□□□ -0.6
SNF8-206ENST00000509989 IGKV1-27A0A075B6S5 117 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 OOEPA6NGQ2 149 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 SYNGR1O43759 233 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 SULT1C4O75897 302 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 IGHA1P01876 353 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 LIMS3P0CW19 117 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 LIMS4P0CW20 117 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 ZNF12P17014 697 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 PITPNBP48739 271 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 RIPPLY1Q0D2K3 151 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 CEACAM21Q3KPI0 293 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 KLF17Q5JT82 389 aaPredicted RBP11.28□□□□□ -0.6
SNF8-206ENST00000509989 TEX36Q5VZQ5 186 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 PLCXD3Q63HM9 321 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 WDR25Q64LD2 544 aaPredicted RBP11.28□□□□□ -0.6
SNF8-206ENST00000509989 TMEM42Q69YG0 159 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 DCDC5Q6ZRR9 648 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 THAP5Q7Z6K1 395 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 C1orf87Q8N0U7 546 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 ACBD7Q8N6N7 88 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 FAM216BQ8N7L0 139 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 OR51A4Q8NGJ6 313 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 NPRL2Q8WTW4 380 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 ALG8Q9BVK2 526 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 SSBP3Q9BWW4 388 aaPredicted RBP11.28□□□□□ -0.6
SNF8-206ENST00000509989 C7orf69Q9H7B7 122 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 ERVK13-1Q9NX77 482 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 LPAR3Q9UBY5 353 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 POLR3KQ9Y2Y1 108 aaPredicted RBP11.28□□□□□ -0.6
SNF8-206ENST00000509989 NOP16Q9Y3C1 178 aaKnown RBP11.28□□□□□ -0.6
SNF8-206ENST00000509989 INSIG2Q9Y5U4 225 aa11.28□□□□□ -0.6
SNF8-206ENST00000509989 IGHV3OR16-10A0A075B7F0 116 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 LOC107986453A0A1B0GWG9 222 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 ANXA2P2A6NMY6 339 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 SRRM5B3KS81 715 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 ADAM20O43506 726 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 FOXH1O75593 365 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 NRASP01111 189 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 FSHBP01225 129 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 SRP14P37108 136 aaKnown RBP11.27□□□□□ -0.61
SNF8-206ENST00000509989 ETV1P50549 477 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 GTF2A1P52655 376 aaPredicted RBP11.27□□□□□ -0.61
SNF8-206ENST00000509989 GNB2P62879 340 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 UBE2V2Q15819 145 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 ESCO2Q56NI9 601 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 ANGPTL5Q86XS5 388 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 CALHM1Q8IU99 346 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 ZNF555Q8NEP9 628 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 TRMT10AQ8TBZ6 339 aaKnown RBP11.27□□□□□ -0.61
SNF8-206ENST00000509989 C22orf15Q8WYQ4 148 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 ADAT3Q96EY9 351 aaPredicted RBP11.27□□□□□ -0.61
SNF8-206ENST00000509989 MOB1AQ9H8S9 216 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 RNPEPL1Q9HAU8 725 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 MRPS18AQ9NVS2 196 aaKnown RBP11.27□□□□□ -0.61
SNF8-206ENST00000509989 MIOXQ9UGB7 285 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 ENPP5Q9UJA9 477 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 ZNF391Q9UJN7 358 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 LRCH1Q9Y2L9 728 aa11.27□□□□□ -0.61
SNF8-206ENST00000509989 A0A0G2JMP0 313 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 A0A0X1KG70 313 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 PQLC2LA1A4F0 135 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 OR4C45A6NMZ5 311 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 F8VVB4 439 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 F8VWA3 439 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 SYT7O43581 403 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 INMTO95050 263 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 FSTL3O95633 263 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 LALBAP00709 142 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 GALEQ14376 348 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 OR2G6Q5TZ20 316 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 HAGHLQ6PII5 290 aaPredicted RBP11.26□□□□□ -0.61
SNF8-206ENST00000509989 DOK3Q7L591 496 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 DHRSXQ8N5I4 330 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 PACRGLQ8N7B6 248 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 OR4M2Q8NGB6 313 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 OR8B3Q8NGG8 313 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 AQP3Q92482 292 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 RDH12Q96NR8 316 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 OR8B2Q96RD0 313 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 ADI1Q9BV57 179 aa11.26□□□□□ -0.61
SNF8-206ENST00000509989 ERVK-18Q9QC07 812 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms