RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 GPR148Q8TDV2 347 aa7.71□□□□□ -1.18
NUP54-207ENST00000508583 TSEN15Q8WW01 171 aaKnown RBP7.71□□□□□ -1.18
NUP54-207ENST00000508583 SPSB1Q96BD6 273 aa7.71□□□□□ -1.18
NUP54-207ENST00000508583 SMIM19Q96E16 107 aa7.71□□□□□ -1.18
NUP54-207ENST00000508583 ZNF649Q9BS31 505 aa7.71□□□□□ -1.18
NUP54-207ENST00000508583 CDCA4Q9BXL8 241 aa7.71□□□□□ -1.18
NUP54-207ENST00000508583 CHST5Q9GZS9 411 aa7.71□□□□□ -1.18
NUP54-207ENST00000508583 TLNRD1Q9H1K6 362 aa7.71□□□□□ -1.18
NUP54-207ENST00000508583 UFSP2Q9NUQ7 469 aa7.71□□□□□ -1.18
NUP54-207ENST00000508583 DHDHQ9UQ10 334 aa7.71□□□□□ -1.18
NUP54-207ENST00000508583 POLDIP2Q9Y2S7 368 aa7.71□□□□□ -1.18
NUP54-207ENST00000508583 PPIAL4AQ9Y536 164 aa7.71□□□□□ -1.18
NUP54-207ENST00000508583 ZNF469Q96JG9 3925 aaPredicted RBP7.7□□□□□ -1.18
NUP54-207ENST00000508583 A0A096LNT2 108 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 IGHV4-61A0A0C4DH41 118 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 LOC100289279A0A1B0GTE1 492 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 B4DSR2 109 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 ZNF732B4DXR9 585 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 CD5LO43866 347 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 MRPS14O60783 128 aaKnown RBP7.7□□□□□ -1.18
NUP54-207ENST00000508583 ZFPL1O95159 310 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 CYB5AP00167 134 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 IGHV2-70P01814 119 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 PRKACBP22694 351 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 CRHBPP24387 322 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 EEF1B2P24534 225 aaKnown RBP7.7□□□□□ -1.18
NUP54-207ENST00000508583 C21orf33P30042 268 aaPredicted RBP7.7□□□□□ -1.18
NUP54-207ENST00000508583 KIR3DL2P43630 455 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 GPM6AP51674 278 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 NANOS3P60323 173 aaKnown RBP7.7□□□□□ -1.18
NUP54-207ENST00000508583 MVKQ03426 396 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 MICBQ29980 383 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 YIF1BQ5BJH7 314 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 FAM76BQ5HYJ3 339 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 CEP78Q5JTW2 689 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 OR2G6Q5TZ20 316 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 PRAMEF6Q5VXH4 476 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 UTS2BQ765I0 119 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 PRSS48Q7RTY5 328 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 LRRC28Q86X40 367 aaPredicted RBP7.7□□□□□ -1.18
NUP54-207ENST00000508583 SERPINA12Q8IW75 414 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 CIARTQ8N365 385 aaPredicted RBP7.7□□□□□ -1.18
NUP54-207ENST00000508583 TEX29Q8N6K0 151 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 NANOGP1Q8N7R0 232 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 LINC01356Q8N9X3 169 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 DNAAF1Q8NEP3 725 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 ZNF420Q8TAQ5 688 aaPredicted RBP7.7□□□□□ -1.18
NUP54-207ENST00000508583 GATAD2BQ8WXI9 593 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 DVL3Q92997 716 aaPredicted RBP7.7□□□□□ -1.18
NUP54-207ENST00000508583 PPP1R14AQ96A00 147 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 C12orf43Q96C57 262 aaKnown RBP7.7□□□□□ -1.18
NUP54-207ENST00000508583 SOX7Q9BT81 388 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 YTHDF1Q9BYJ9 559 aaKnown RBP7.7□□□□□ -1.18
NUP54-207ENST00000508583 CCDC90BQ9GZT6 254 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 ZNF665Q9H7R5 613 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 C1orf123Q9NWV4 160 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 TREM2Q9NZC2 230 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 CKLFQ9UBR5 152 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 MIOXQ9UGB7 285 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 ZNF281Q9Y2X9 895 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 CACNG2Q9Y698 323 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 ACANP16112 2415 aa7.7□□□□□ -1.18
NUP54-207ENST00000508583 ABCA1O95477 2261 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 IGHV3-64DA0A0J9YX35 117 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 OOEPA6NGQ2 149 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 J3QT63 122 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 MAGEB3O15480 346 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 OGG1O15527 345 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 CYB5R3P00387 301 aaPredicted RBP7.69□□□□□ -1.18
NUP54-207ENST00000508583 CD1AP06126 327 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 MUC1P15941 1255 aaPredicted RBP7.69□□□□□ -1.18
NUP54-207ENST00000508583 MAPK3P27361 379 aaPredicted RBP7.69□□□□□ -1.18
NUP54-207ENST00000508583 FUT6P51993 359 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 GABARAPL2P60520 117 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 PPP3R1P63098 170 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 ACSM1Q08AH1 577 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 SPHARQ15513 63 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 MPPED2Q15777 294 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 AVPI1Q5T686 147 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 LAIR2Q6ISS4 152 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 FAM166AQ6J272 317 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 DCDC5Q6ZRR9 648 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 LHFPL2Q6ZUX7 228 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 RDH10Q8IZV5 341 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 SVOPQ8N4V2 548 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 OR51F2Q8NH61 342 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 CLDND2Q8NHS1 167 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 RPS4Y2Q8TD47 263 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 HPSE2Q8WWQ2 592 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 BORCS8Q96FH0 119 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 PDCD1LG2Q9BQ51 273 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 DUSP21Q9H596 190 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 NARFLQ9H6Q4 476 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 GPR173Q9NS66 373 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 RASL12Q9NYN1 266 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 UBAP1Q9NZ09 502 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 ERVK-18Q9QC07 812 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 CLEC2DQ9UHP7 191 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 KCNS2Q9ULS6 477 aa7.69□□□□□ -1.18
NUP54-207ENST00000508583 LRCH1Q9Y2L9 728 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms