RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 CCDC172P0C7W6 258 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 TROVE2P10155 538 aaKnown RBP eCLIP3.84□□□□□ -1.79
HERC4-213ENST00000506515 CAPZBP47756 277 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 CRISP3P54108 245 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 KRTAP12-2P59991 146 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 DCDP81605 110 aaKnown RBP3.84□□□□□ -1.79
HERC4-213ENST00000506515 ZNF92Q03936 586 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 SYCP1Q15431 976 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 ZCWPW2Q504Y3 356 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 COA6Q5JTJ3 125 aaKnown RBP3.84□□□□□ -1.79
HERC4-213ENST00000506515 ARMC12Q5T9G4 340 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 TIFABQ6ZNK6 161 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 FAM183BPQ6ZVS7 135 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 OOSP2Q86WS3 158 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 HSD17B11Q8NBQ5 300 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 B3GNT7Q8NFL0 401 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 CA5BP1Q8WTZ4 195 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 AURKBQ96GD4 344 aaPredicted RBP3.84□□□□□ -1.79
HERC4-213ENST00000506515 ZNF414Q96IQ9 312 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 CENPKQ9BS16 269 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 OSBPL10Q9BXB5 764 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 GABARAPL3Q9BY60 117 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 SLC25A39Q9BZJ4 359 aaPredicted RBP3.84□□□□□ -1.79
HERC4-213ENST00000506515 GPR61Q9BZJ8 451 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 CTPS2Q9NRF8 586 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 GPATCH2LQ9NWQ4 482 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 HRASLS2Q9NWW9 162 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 STOX2Q9P2F5 926 aaPredicted RBP3.84□□□□□ -1.79
HERC4-213ENST00000506515 ZNF223Q9UK11 482 aaPredicted RBP3.84□□□□□ -1.79
HERC4-213ENST00000506515 NXT1Q9UKK6 140 aaKnown RBP3.84□□□□□ -1.79
HERC4-213ENST00000506515 WSB1Q9Y6I7 421 aa3.84□□□□□ -1.79
HERC4-213ENST00000506515 TNRC6AQ8NDV7 1962 aaKnown RBP3.83□□□□□ -1.8
HERC4-213ENST00000506515 CSMD2Q7Z408 3487 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 FBN3Q75N90 2809 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 DNHD1Q96M86 4753 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 IGHV3-64DA0A0J9YX35 117 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 CIB4A0PJX0 185 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 PRSS37A4D1T9 235 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 ZNF726A6NNF4 738 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 PDZK1P1A8MUH7 402 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 E7EQ34 232 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 XKRYO14609 159 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 CASC3O15234 703 aaKnown RBP3.83□□□□□ -1.8
HERC4-213ENST00000506515 RNF13O43567 381 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 EIF3GO75821 320 aaKnown RBP eCLIP3.83□□□□□ -1.8
HERC4-213ENST00000506515 SLC25A14O95258 325 aaPredicted RBP3.83□□□□□ -1.8
HERC4-213ENST00000506515 CRYGBP07316 175 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 IGHV3-43DP0DP04 118 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 CA7P43166 264 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 CDKN1BP46527 198 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 TFPI2P48307 235 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 HCAR3P49019 387 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 CCR8P51685 355 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 CDH6P55285 790 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 GPX6P59796 221 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 UBE2IP63279 158 aaKnown RBP3.83□□□□□ -1.8
HERC4-213ENST00000506515 ARG2P78540 354 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 NCF4Q15080 339 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 EXOC3L4Q17RC7 722 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 TMEM183BQ1AE95 376 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 PIGGQ5H8A4 983 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 LINC00173Q6ZV60 143 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 TMEM183AQ8IXX5 376 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 MS4A15Q8N5U1 240 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 CEP112Q8N8E3 955 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 OR1S2Q8NGQ3 325 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 OR2Y1Q8NGV0 311 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 ITLN2Q8WWU7 325 aaPredicted RBP3.83□□□□□ -1.8
HERC4-213ENST00000506515 TMEM54Q969K7 222 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 ASB9Q96DX5 294 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 COX14Q96I36 57 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 FAM210BQ96KR6 192 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 ZNF285Q96NJ3 590 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 TIMM29Q9BSF4 260 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 CHRNA10Q9GZZ6 450 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 CDC42EP4Q9H3Q1 356 aaKnown RBP3.83□□□□□ -1.8
HERC4-213ENST00000506515 SLC40A1Q9NP59 571 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 BTRCQ9Y297 605 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 F11RQ9Y624 299 aaKnown RBP3.83□□□□□ -1.8
HERC4-213ENST00000506515 ARHGAP21Q5T5U3 1957 aa3.83□□□□□ -1.8
HERC4-213ENST00000506515 LRP4O75096 1905 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 ERLIN1O75477 346 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 WBP4O75554 376 aaKnown RBP3.82□□□□□ -1.8
HERC4-213ENST00000506515 CDK14O94921 469 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 CALB1P05937 261 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 UQCRHP07919 91 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 FOLR1P15328 257 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 ZNF7P17097 686 aaPredicted RBP3.82□□□□□ -1.8
HERC4-213ENST00000506515 CASP1P29466 404 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 TPI1P60174 286 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 ECH1Q13011 328 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 CAPRIN1Q14444 709 aaKnown RBP3.82□□□□□ -1.8
HERC4-213ENST00000506515 MLIPQ5VWP3 458 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 DCUN1D2Q6PH85 259 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 FAM92BQ6ZTR7 304 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 TMEM135Q86UB9 458 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 RHEBL1Q8TAI7 183 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 GPR151Q8TDV0 419 aa3.82□□□□□ -1.8
HERC4-213ENST00000506515 PHF10Q8WUB8 498 aaKnown RBP3.82□□□□□ -1.8
HERC4-213ENST00000506515 PATE1Q8WXA2 126 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms