RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 KCTD8Q6ZWB6 473 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 LY6G5BQ8NDX9 201 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 RTL8AQ9BWD3 113 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 YIPF3Q9GZM5 350 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 FAM192AQ9GZU8 254 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 DCLRE1BQ9H816 532 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 ACOXLQ9NUZ1 547 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 HAO2Q9NYQ3 351 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 DNAJB11Q9UBS4 358 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 TMEM269A0A1B0GVZ9 245 aa13.38□□□□□ -0.27
SCLT1-204ENST00000503215 ECDO95905 644 aaPredicted RBP13.38□□□□□ -0.27
SCLT1-204ENST00000503215 GPM6AP51674 278 aa13.38□□□□□ -0.27
SCLT1-204ENST00000503215 BPIFB3P59826 476 aa13.38□□□□□ -0.27
SCLT1-204ENST00000503215 MFGE8Q08431 387 aaPredicted RBP13.38□□□□□ -0.27
SCLT1-204ENST00000503215 DYNC1I2Q13409 638 aaKnown RBP13.38□□□□□ -0.27
SCLT1-204ENST00000503215 DGUOKQ16854 277 aa13.38□□□□□ -0.27
SCLT1-204ENST00000503215 CEP78Q5JTW2 689 aa13.38□□□□□ -0.27
SCLT1-204ENST00000503215 ATPAF1Q5TC12 328 aaPredicted RBP13.38□□□□□ -0.27
SCLT1-204ENST00000503215 VMO1Q7Z5L0 202 aa13.38□□□□□ -0.27
SCLT1-204ENST00000503215 GATAD2BQ8WXI9 593 aa13.38□□□□□ -0.27
SCLT1-204ENST00000503215 TSC22D3Q99576 134 aa13.38□□□□□ -0.27
SCLT1-204ENST00000503215 SEMA6AQ9H2E6 1030 aa13.38□□□□□ -0.27
SCLT1-204ENST00000503215 NOX4Q9NPH5 578 aa13.38□□□□□ -0.27
SCLT1-204ENST00000503215 ONECUT1Q9UBC0 465 aa13.38□□□□□ -0.27
SCLT1-204ENST00000503215 ZNF391Q9UJN7 358 aa13.38□□□□□ -0.27
SCLT1-204ENST00000503215 NDUFB3O43676 98 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 IGHV4-59P01825 116 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 HOXB6P17509 224 aaKnown RBP13.37□□□□□ -0.27
SCLT1-204ENST00000503215 PDCD1Q15116 288 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 CDONQ4KMG0 1287 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 PRR31Q5SQ13 230 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 SLC36A1Q7Z2H8 476 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 ZDHHC23Q8IYP9 409 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 Q8N7P7 452 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 OR10Z1Q8NGY1 313 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 ANGPTL6Q8NI99 470 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 OR51E1Q8TCB6 317 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 C12orf43Q96C57 262 aaKnown RBP13.37□□□□□ -0.27
SCLT1-204ENST00000503215 NRBF2Q96F24 287 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 FAM71F1Q96KD3 344 aaPredicted RBP13.37□□□□□ -0.27
SCLT1-204ENST00000503215 GAFA1Q96PS6 74 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 APOL4Q9BPW4 351 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 PBOV1Q9GZY1 135 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 OR51I2Q9H344 312 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 NIPAL2Q9H841 368 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 ELL3Q9HB65 397 aaPredicted RBP13.37□□□□□ -0.27
SCLT1-204ENST00000503215 GPR84Q9NQS5 396 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 SIRT7Q9NRC8 400 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 C1RLQ9NZP8 487 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 KIF17Q9P2E2 1029 aa13.37□□□□□ -0.27
SCLT1-204ENST00000503215 A0A1W2PRD5 423 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 A0A1W2PRF3 423 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 A0A1W2PRM7 423 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 TMEM210A6NLX4 147 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 ZNF732B4DXR9 585 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 EFNB1P98172 346 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 ROM1Q03395 351 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 KLRD1Q13241 179 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 ZNF788Q6ZQV5 615 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 PLEKHG7Q6ZR37 379 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 KRT74Q7RTS7 529 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 PNKDQ8N490 385 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 FTMTQ8N4E7 242 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 KIR3DL3Q8N743 410 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 OR5K1Q8NHB7 308 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 FAM81AQ8TBF8 368 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 OR8B4Q96RC9 309 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 DCTN5Q9BTE1 182 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 KPTNQ9Y664 436 aa13.36□□□□□ -0.27
SCLT1-204ENST00000503215 A0A0U1RQV5 110 aa13.35□□□□□ -0.27
SCLT1-204ENST00000503215 ZNF816-ZNF321PA0A0X1KG74 233 aa13.35□□□□□ -0.27
SCLT1-204ENST00000503215 POM121CA8CG34 1229 aa13.35□□□□□ -0.27
SCLT1-204ENST00000503215 WIPF1O43516 503 aa13.35□□□□□ -0.27
SCLT1-204ENST00000503215 SRSF10O75494 262 aaKnown RBP13.35□□□□□ -0.27
SCLT1-204ENST00000503215 IGLV3-1P01715 115 aa13.35□□□□□ -0.27
SCLT1-204ENST00000503215 FAHP16930 419 aa13.35□□□□□ -0.27
SCLT1-204ENST00000503215 MAP2K3P46734 347 aa13.35□□□□□ -0.27
SCLT1-204ENST00000503215 DEGS2Q6QHC5 323 aa13.35□□□□□ -0.27
SCLT1-204ENST00000503215 MOB3CQ70IA8 216 aa13.35□□□□□ -0.27
SCLT1-204ENST00000503215 AMIGO2Q86SJ2 522 aa13.35□□□□□ -0.27
SCLT1-204ENST00000503215 ZNF679Q8IYX0 411 aa13.35□□□□□ -0.27
SCLT1-204ENST00000503215 TCEANCQ8N8B7 351 aa13.35□□□□□ -0.27
SCLT1-204ENST00000503215 H1FXQ92522 213 aaKnown RBP13.35□□□□□ -0.27
SCLT1-204ENST00000503215 TEX12Q9BXU0 123 aa13.35□□□□□ -0.27
SCLT1-204ENST00000503215 MROQ9BYG7 248 aa13.35□□□□□ -0.27
SCLT1-204ENST00000503215 ZNF696Q9H7X3 374 aa13.35□□□□□ -0.27
SCLT1-204ENST00000503215 IGKV1D-17A0A075B6S4 117 aa13.34□□□□□ -0.27
SCLT1-204ENST00000503215 ACOD1A6NK06 481 aa13.34□□□□□ -0.27
SCLT1-204ENST00000503215 RNASEK-C17orf49H0YIS7 233 aa13.34□□□□□ -0.27
SCLT1-204ENST00000503215 TTRP02766 147 aa13.34□□□□□ -0.27
SCLT1-204ENST00000503215 POLR2IP36954 125 aaKnown RBP13.34□□□□□ -0.27
SCLT1-204ENST00000503215 RAG2P55895 527 aa13.34□□□□□ -0.27
SCLT1-204ENST00000503215 GNG3P63215 75 aa13.34□□□□□ -0.27
SCLT1-204ENST00000503215 ATP6AP1Q15904 470 aa13.34□□□□□ -0.27
SCLT1-204ENST00000503215 CEACAM21Q3KPI0 293 aa13.34□□□□□ -0.27
SCLT1-204ENST00000503215 LRRC10Q5BKY1 277 aa13.34□□□□□ -0.27
SCLT1-204ENST00000503215 AADACL4Q5VUY2 407 aa13.34□□□□□ -0.27
SCLT1-204ENST00000503215 KCTD18Q6PI47 426 aaPredicted RBP13.34□□□□□ -0.27
SCLT1-204ENST00000503215 MEPCEQ7L2J0 689 aaKnown RBP13.34□□□□□ -0.27
SCLT1-204ENST00000503215 COMMD2Q86X83 199 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms