RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 GAPDHP04406 335 aaKnown RBP11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 BCKDHBP21953 392 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 ZNF93P35789 620 aaPredicted RBP11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 RND3P61587 244 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 CD226Q15762 336 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 CATSPERDQ86XM0 798 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 C1orf87Q8N0U7 546 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 TAAR8Q969N4 342 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 RSPRY1Q96DX4 576 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 COX14Q96I36 57 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 RHBDD3Q9Y3P4 386 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 FXYD4P59646 89 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 ACKR1Q16570 336 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 ZNF705AQ6ZN79 300 aaPredicted RBP11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 Q7L0L9 218 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 MRPL41Q8IXM3 137 aaKnown RBP11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 PRR22Q8IZ63 422 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 DTWD2Q8NBA8 298 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 ADAT3Q96EY9 351 aaPredicted RBP11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 GDE1Q9NZC3 331 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 AK3Q9UIJ7 227 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 WSB1Q9Y6I7 421 aa11.58□□□□□ -0.56
GAPVD1-220ENST00000497580 FAM186AA6NE01 2351 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 CNOT4O95628 575 aaKnown RBP11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 NPSP0C0P6 89 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 OR5H8P0DN80 308 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 FUT3P21217 361 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 LBX1P52954 281 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 RAB11AP62491 216 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 PLAC9Q5JTB6 97 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 SLC22A25Q6T423 547 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 VITQ6UXI7 678 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 SULF2Q8IWU5 870 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 ZNF264O43296 627 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 H2BFMP0C1H6 154 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 LYL1P12980 280 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 IGFBP3P17936 291 aaPredicted RBP11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 APOBEC1P41238 236 aaKnown RBP11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 NCR3LG1Q68D85 454 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 SLC22A24Q8N4F4 322 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 TVP23CQ96ET8 276 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 CCDC3Q9BQI4 270 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 OPN3Q9H1Y3 402 aaPredicted RBP11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 SERGEFQ9UGK8 458 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 MRPS28Q9Y2Q9 187 aaKnown RBP11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 LAMA1P25391 3075 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 NXPH3O95157 252 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 SEC11BP0C7V7 166 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 MYOGP15173 224 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 ZNF20P17024 532 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 FMODQ06828 376 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 ZNF542PQ5EBM4 170 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 COL13A1Q5TAT6 717 aaPredicted RBP11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 ALKBH2Q6NS38 261 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 C5orf24Q7Z6I8 188 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 FAM160A2Q8N612 972 aaPredicted RBP11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 TMEM59Q9BXS4 323 aa11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 VSX1Q9NZR4 365 aaPredicted RBP11.57□□□□□ -0.56
GAPVD1-220ENST00000497580 IFNL4K9M1U5 179 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 ZNF217O75362 1048 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 EGR4Q05215 589 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 ELAVL3Q14576 367 aaKnown RBP11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 WDR25Q64LD2 544 aaPredicted RBP11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 NPSR1Q6W5P4 371 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 NKAIN3Q8N8D7 197 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 LRRC75AQ8NAA5 344 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 YPEL4Q96NS1 127 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 GPX7Q96SL4 187 aaPredicted RBP11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 PHPT1Q9NRX4 125 aaPredicted RBP11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 TMED3Q9Y3Q3 217 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 A6NIZ1 184 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 MARCH11A6NNE9 402 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 H0YGG7 62 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 EML2O95834 649 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 SCGB1D1O95968 90 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 OR3A4PP47883 348 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 RAB38P57729 211 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 ARF3P61204 181 aaPredicted RBP11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 RAP1BP61224 184 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 RPL23AP62750 156 aaKnown RBP11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 ISXQ2M1V0 245 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 AADACL3Q5VUY0 350 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 ADAMTSL4Q6UY14 1074 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 PRSS58Q8IYP2 241 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 TMEM217Q8N7C4 229 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 SLC35G3Q8N808 338 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 OR52N5Q8NH56 324 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 FAM71F1Q96KD3 344 aaPredicted RBP11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 FOXD3Q9UJU5 478 aaPredicted RBP11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 PADI1Q9ULC6 663 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 SLC7A11Q9UPY5 501 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 A0A0A6YYD4 124 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 LINC01553A4QN01 128 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 TLCD2A6NGC4 264 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 MBPP02686 304 aaPredicted RBP11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 AMBPP02760 352 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 MGAT2Q10469 447 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 PHLDA2Q53GA4 152 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 C1orf100Q5SVJ3 147 aa11.56□□□□□ -0.56
GAPVD1-220ENST00000497580 WBP2NLQ6ICG8 309 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms