RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 NLRC3Q7RTR2 1065 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 TEX29Q8N6K0 151 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 OR5A2Q8NGI9 324 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 OR52I1Q8NGK6 324 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 OR14K1Q8NGZ2 314 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 OR2G2Q8NGZ5 317 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 PPP1R14AQ96A00 147 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 RNF170Q96K19 258 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 C4orf36Q96KX1 117 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 ALG8Q9BVK2 526 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 SHARPINQ9H0F6 387 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 TMEM165Q9HC07 324 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 AMBNQ9NP70 447 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 HIF1ANQ9NWT6 349 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 ERVK13-1Q9NX77 482 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 NKX1-2Q9UD57 310 aaPredicted RBP9.61□□□□□ -0.87
HLA-B-254ENST00000497377 PIGLQ9Y2B2 252 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 LRCH1Q9Y2L9 728 aa9.61□□□□□ -0.87
HLA-B-254ENST00000497377 ZFHX3Q15911 3703 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 CEACAM18A8MTB9 384 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 J3QLI3 93 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 J3QLW9 94 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 P2RY10O00398 339 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 SYT7O43581 403 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 PLPP2O43688 288 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 CLIC3O95833 236 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 LHBP01229 141 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 ISG15P05161 165 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 HTR1AP08908 422 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 WNT2P09544 360 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 RPS2P15880 293 aaKnown RBP9.6□□□□□ -0.87
HLA-B-254ENST00000497377 FAHP16930 419 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 ZNF19P17023 458 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 OR12D2P58182 307 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 ESCO2Q56NI9 601 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 WDR38Q5JTN6 314 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 PLCXD3Q63HM9 321 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 KCTD8Q6ZWB6 473 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 WDR86Q86TI4 376 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 LHFPL3Q86UP9 236 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 OR10Z1Q8NGY1 313 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 CNIH3Q8TBE1 160 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 HPSE2Q8WWQ2 592 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 PELI1Q96FA3 418 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 NEIL1Q96FI4 390 aaPredicted RBP9.6□□□□□ -0.87
HLA-B-254ENST00000497377 TECTBQ96PL2 329 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 TMEM246Q9BRR3 403 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 BEX2Q9BXY8 128 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 PLEKHA1Q9HB21 404 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 MYRFQ9Y2G1 1151 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 POLR3KQ9Y2Y1 108 aaPredicted RBP9.6□□□□□ -0.87
HLA-B-254ENST00000497377 NAV3Q8IVL0 2385 aa9.6□□□□□ -0.87
HLA-B-254ENST00000497377 DOCK11Q5JSL3 2073 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 A0A0G2JMP0 313 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 A0A0X1KG70 313 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 LOC107986453A0A1B0GWG9 222 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 OOEPA6NGQ2 149 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 A8MXK9 166 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 FAM157CP0CG43 387 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 MUC1P15941 1255 aaPredicted RBP9.59□□□□□ -0.87
HLA-B-254ENST00000497377 THBS2P35442 1172 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 PSMB10P40306 273 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 KIR3DL2P43630 455 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 GPM6AP51674 278 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 GBX2P52951 348 aaPredicted RBP9.59□□□□□ -0.87
HLA-B-254ENST00000497377 HNRNPA0Q13151 305 aaKnown RBP9.59□□□□□ -0.87
HLA-B-254ENST00000497377 ALKBH1Q13686 389 aaKnown RBP9.59□□□□□ -0.87
HLA-B-254ENST00000497377 SMN1Q16637 294 aaKnown RBP9.59□□□□□ -0.87
HLA-B-254ENST00000497377 CR1LQ2VPA4 569 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 KRTAP21-3Q3LHN1 58 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 CEP78Q5JTW2 689 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 FAM120AOSQ5T036 256 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 TEX36Q5VZQ5 186 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 WDR82Q6UXN9 313 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 TMPRSS11AQ6ZMR5 421 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 ZNF826PQ6ZT77 177 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 MOB3CQ70IA8 216 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 C11orf53Q8IXP5 236 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 PRSS35Q8N3Z0 413 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 GCSAMQ8N6F7 178 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 SCCPDHQ8NBX0 429 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 OR4M2Q8NGB6 313 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 OR8B3Q8NGG8 313 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 ZNF671Q8TAW3 534 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 FBLIM1Q8WUP2 373 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 LRRC29Q8WV35 223 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 EDARADDQ8WWZ3 215 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 TFAP2CQ92754 450 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 C12orf43Q96C57 262 aaKnown RBP9.59□□□□□ -0.87
HLA-B-254ENST00000497377 OR8B2Q96RD0 313 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 ZNF649Q9BS31 505 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 SSBP3Q9BWW4 388 aaPredicted RBP9.59□□□□□ -0.87
HLA-B-254ENST00000497377 PPP1R3EQ9H7J1 279 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 LPAR2Q9HBW0 351 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 FRRS1LQ9P0K9 344 aa9.59□□□□□ -0.87
HLA-B-254ENST00000497377 DIMT1Q9UNQ2 313 aaKnown RBP9.59□□□□□ -0.87
HLA-B-254ENST00000497377 CAB39Q9Y376 341 aaPredicted RBP9.59□□□□□ -0.87
HLA-B-254ENST00000497377 EXOSC1Q9Y3B2 195 aaKnown RBP9.59□□□□□ -0.87
HLA-B-254ENST00000497377 EFCAB10A6NFE3 127 aa9.58□□□□□ -0.88
HLA-B-254ENST00000497377 ANKRD61A6NGH8 418 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms