RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 FGF12P61328 243 aa12.53□□□□□ -0.4
USP39-217ENST00000491659 GNG3P63215 75 aa12.53□□□□□ -0.4
USP39-217ENST00000491659 C11orf91Q3C1V1 193 aa12.53□□□□□ -0.4
USP39-217ENST00000491659 CEACAM21Q3KPI0 293 aa12.53□□□□□ -0.4
USP39-217ENST00000491659 WDR38Q5JTN6 314 aa12.53□□□□□ -0.4
USP39-217ENST00000491659 CEP78Q5JTW2 689 aa12.53□□□□□ -0.4
USP39-217ENST00000491659 PLCXD3Q63HM9 321 aa12.53□□□□□ -0.4
USP39-217ENST00000491659 PLEKHG7Q6ZR37 379 aa12.53□□□□□ -0.4
USP39-217ENST00000491659 DOK3Q7L591 496 aa12.53□□□□□ -0.4
USP39-217ENST00000491659 YIPF7Q8N8F6 280 aa12.53□□□□□ -0.4
USP39-217ENST00000491659 OR10H4Q8NGA5 316 aa12.53□□□□□ -0.4
USP39-217ENST00000491659 OR2T27Q8NH04 317 aa12.53□□□□□ -0.4
USP39-217ENST00000491659 ST8SIA4Q92187 359 aa12.53□□□□□ -0.4
USP39-217ENST00000491659 FGF23Q9GZV9 251 aaPredicted RBP12.53□□□□□ -0.4
USP39-217ENST00000491659 MRM2Q9UI43 246 aaKnown RBP12.53□□□□□ -0.4
USP39-217ENST00000491659 ZNF879B4DU55 563 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 ZNF732B4DXR9 585 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 H0YHG0 523 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.52□□□□□ -0.41
USP39-217ENST00000491659 MAGEB4O15481 346 aaPredicted RBP12.52□□□□□ -0.41
USP39-217ENST00000491659 RPP14O95059 124 aaKnown RBP12.52□□□□□ -0.41
USP39-217ENST00000491659 APOL3O95236 402 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 MTNR1AP48039 350 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 FAM76BQ5HYJ3 339 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 C12orf54Q6X4T0 127 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 MOB3CQ70IA8 216 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 KRT74Q7RTS7 529 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 SSX6Q7RTT6 188 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 FAM220AQ7Z4H9 259 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 ELMOD2Q8IZ81 293 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 TRUB1Q8WWH5 349 aaKnown RBP12.52□□□□□ -0.41
USP39-217ENST00000491659 PPP1R14AQ96A00 147 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 EME1Q96AY2 570 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 RAB3IPQ96QF0 476 aaPredicted RBP12.52□□□□□ -0.41
USP39-217ENST00000491659 CCL13Q99616 98 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 PCGF1Q9BSM1 259 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 RASSF4Q9H2L5 321 aa12.52□□□□□ -0.41
USP39-217ENST00000491659 ZMAT3Q9HA38 289 aaKnown RBP12.52□□□□□ -0.41
USP39-217ENST00000491659 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.52□□□□□ -0.41
USP39-217ENST00000491659 A0A1W2PQL4 384 aaPredicted RBP12.51□□□□□ -0.41
USP39-217ENST00000491659 HAX1O00165 279 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 P2RY10O00398 339 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 AKR7A2O43488 359 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 NDUFB3O43676 98 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 TOX4O94842 621 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 PLATP00750 562 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 UBA52P62987 128 aaKnown RBP12.51□□□□□ -0.41
USP39-217ENST00000491659 LRRC10Q5BKY1 277 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 ZNF684Q5T5D7 378 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 GPR157Q5UAW9 335 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 METTL11BQ5VVY1 283 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 STUMQ69YW2 141 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 C9orf139Q6ZV77 190 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 BTN2A1Q7KYR7 527 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 BCL6BQ8N143 479 aaPredicted RBP12.51□□□□□ -0.41
USP39-217ENST00000491659 FAM216BQ8N7L0 139 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 ZDHHC22Q8N966 263 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 OR5A2Q8NGI9 324 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 SEH1LQ96EE3 360 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 HRASLS5Q96KN8 279 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 C9orf16Q9BUW7 83 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 DNTTIP1Q9H147 329 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 PLEKHA1Q9HB21 404 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 ESM1Q9NQ30 184 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 SNTG1Q9NSN8 517 aa12.51□□□□□ -0.41
USP39-217ENST00000491659 A0A1B0GVI7 797 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 DNAJC9-AS1A6NH13 148 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 METTL15A6NJ78 407 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 DHRS7CA6NNS2 312 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 GPR37O15354 613 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 SULT1C4O75897 302 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 NRASP01111 189 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 GLRA1P23415 457 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 BAMBIQ13145 260 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 IKZF1Q13422 519 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 TUSC1Q2TAM9 212 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 ZIK1Q3SY52 487 aaPredicted RBP12.5□□□□□ -0.41
USP39-217ENST00000491659 CLVS2Q5SYC1 327 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 CBR4Q8N4T8 237 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 OR5T2Q8NGG2 359 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 ZNF671Q8TAW3 534 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 GCDHQ92947 438 aaPredicted RBP12.5□□□□□ -0.41
USP39-217ENST00000491659 WDR13Q9H1Z4 485 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 OR51I2Q9H344 312 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 NLKQ9UBE8 527 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 RPUSD1Q9UJJ7 312 aaKnown RBP12.5□□□□□ -0.41
USP39-217ENST00000491659 V9GYS6 101 aa12.5□□□□□ -0.41
USP39-217ENST00000491659 A0A1B0GW55 424 aa12.49□□□□□ -0.41
USP39-217ENST00000491659 SNTNA6NMZ2 147 aa12.49□□□□□ -0.41
USP39-217ENST00000491659 ANKRD65E5RJM6 399 aa12.49□□□□□ -0.41
USP39-217ENST00000491659 DLGAP1O14490 977 aa12.49□□□□□ -0.41
USP39-217ENST00000491659 RHBDL1O75783 438 aa12.49□□□□□ -0.41
USP39-217ENST00000491659 SFTPBP07988 381 aa12.49□□□□□ -0.41
USP39-217ENST00000491659 DUX4L2P0CJ85 424 aa12.49□□□□□ -0.41
USP39-217ENST00000491659 DUX4L3P0CJ86 424 aa12.49□□□□□ -0.41
USP39-217ENST00000491659 DUX4L4P0CJ87 422 aa12.49□□□□□ -0.41
USP39-217ENST00000491659 DUX4L5P0CJ88 424 aa12.49□□□□□ -0.41
USP39-217ENST00000491659 DUX4L6P0CJ89 424 aa12.49□□□□□ -0.41
USP39-217ENST00000491659 DUX4L7P0CJ90 424 aa12.49□□□□□ -0.41
USP39-217ENST00000491659 BPIFB3P59826 476 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms