RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 ADARB2Q9NS39 739 aaKnown RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 MED9Q9NWA0 146 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 MS4A12Q9NXJ0 267 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 STAP1Q9ULZ2 295 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 KCNIP3Q9Y2W7 256 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 SAMHD1Q9Y3Z3 626 aaKnown RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 KMT2EQ8IZD2 1858 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 TRAV19A0A0A6YYK7 116 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 SMIM28A0A1B0GU29 152 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 FABP12A6NFH5 140 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 RFPL4AA6NLU0 287 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 A8MXK9 166 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 NEDD8-MDP1E9PL57 170 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 RFPL4AL1F8VTS6 287 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 PRMT5O14744 637 aaPredicted RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 EDIL3O43854 480 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 PTNP21246 168 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 IL12BP29460 328 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 TGFBR1P36897 503 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 CCR8P51685 355 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 DYNLL1P63167 89 aaKnown RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 FCN2Q15485 313 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF57Q68EA5 555 aaPredicted RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 RBMS3Q6XE24 437 aaKnown RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 SSX6Q7RTT6 188 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 BHLHA9Q7RTU4 235 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 SLC34A3Q8N130 599 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 FTMTQ8N4E7 242 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 JAGN1Q8N5M9 183 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 ACTL9Q8TC94 416 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 TMBIM1Q969X1 311 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 CREB3L1Q96BA8 519 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 TCEAL4Q96EI5 215 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 DIRAS2Q96HU8 199 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 PPP1R16AQ96I34 528 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 RBP7Q96R05 134 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 NKX3-1Q99801 234 aaPredicted RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 HOPXQ9BPY8 73 aaPredicted RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 UGT2B28Q9BY64 529 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 SLC29A3Q9BZD2 475 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 TM6SF2Q9BZW4 377 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 NXF2Q9GZY0 626 aaKnown RBP2.33□□□□□ -2.04
UBXN4-208ENST00000490163 WDR13Q9H1Z4 485 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 ACOT13Q9NPJ3 140 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 FIS1Q9Y3D6 152 aa2.33□□□□□ -2.04
UBXN4-208ENST00000490163 IGHV3-16A0A0C4DH30 117 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 LOC100130705A0A1B0GUX0 176 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 A0A1B0GVT2 93 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 GNG14A0A1W2PPG7 69 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 D6RAR5 112 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 G3V4G9 280 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 K7ERI5 159 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TOX3O15405 576 aaPredicted RBP2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SNAPC5O75971 98 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SUPT7LO94864 414 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 LGALS2P05162 132 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 IGFBP1P08833 259 aaPredicted RBP2.32□□□□□ -2.04
UBXN4-208ENST00000490163 CTXN2P0C2S0 81 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 HSD17B1P14061 328 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 S100A2P29034 98 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 HOXC5Q00444 222 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 CYP24A1Q07973 514 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 BIKQ13323 160 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TAF1AQ15573 450 aaPredicted RBP2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TFDP3Q5H9I0 405 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 ACER2Q5QJU3 275 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 FAM74A1Q5RGS3 127 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 GPR157Q5UAW9 335 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 C9orf57Q5W0N0 161 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SCIMPQ6UWF3 145 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SVBPQ8N300 66 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 NKAPP1Q8N9T2 125 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 CCDC71LQ8N9Z2 235 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 ZSCAN4Q8NAM6 433 aaPredicted RBP2.32□□□□□ -2.04
UBXN4-208ENST00000490163 OR9Q1Q8NGQ5 310 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 OR1L6Q8NGR2 347 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 OR2L8Q8NGY9 312 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 OR6X1Q8NH79 312 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 STOML3Q8TAV4 291 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 CNIH3Q8TBE1 160 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TBCKQ8TEA7 893 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TADA1Q96BN2 335 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 C3orf30Q96M34 536 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 COL21A1Q96P44 957 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TBX15Q96SF7 602 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 HSD17B14Q9BPX1 270 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 FGFBP2Q9BYJ0 223 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 SRRQ9GZT4 340 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TMPRSS5Q9H3S3 457 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 ASB8Q9H765 288 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 CUTCQ9NTM9 273 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 RBFOX1Q9NWB1 397 aaKnown RBP2.32□□□□□ -2.04
UBXN4-208ENST00000490163 CLEC2DQ9UHP7 191 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 RARRES3Q9UL19 164 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 KIAA1549LQ6ZVL6 1849 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 TMEM210A6NLX4 147 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 C15orf65H3BRN8 121 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 NTN3O00634 580 aaPredicted RBP2.32□□□□□ -2.04
UBXN4-208ENST00000490163 NME4O00746 187 aa2.32□□□□□ -2.04
UBXN4-208ENST00000490163 LYRM1O43325 122 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms