RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 FOXI3A8MTJ6 420 aaPredicted RBP2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 LRRN3E7EW58 273 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 H0Y980 276 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 SLC17A2O00624 439 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 PLPP3O14495 311 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 RAD51CO43502 376 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 SLC16A7O60669 478 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 CD8AP01732 235 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 ORM1P02763 201 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 LIMS3P0CW19 117 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 LIMS4P0CW20 117 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 CD37P11049 281 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 ZNF35P13682 527 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 GGT1P19440 569 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 ZP3P21754 424 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 VDAC1P21796 283 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 PRKACGP22612 351 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 HSD11B1P28845 292 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 SERPINB9P50453 376 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 PSMD7P51665 324 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 NKX2-5P52952 324 aaPredicted RBP2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 TAS2R31P59538 309 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 AP3S2P59780 193 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 CXCR4P61073 352 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 ERVK-16P61578 105 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 REEP5Q00765 189 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 SMARCB1Q12824 385 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 CASP8Q14790 479 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 PDK2Q15119 407 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 BSXQ3C1V8 233 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 MARCH8Q5T0T0 291 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 FRMPD2BQ6IN97 320 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 TTC33Q6PID6 262 aaPredicted RBP2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 DRAM2Q6UX65 266 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 LRRTM1Q86UE6 522 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 FTMTQ8N4E7 242 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 TMEM251Q8N6I4 163 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 LFNGQ8NES3 379 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 OR2A12Q8NGT7 310 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 ESR2Q92731 530 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 STMN2Q93045 179 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 LRRC58Q96CX6 371 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 OTUB2Q96DC9 234 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 SGTBQ96EQ0 304 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 SEC22AQ96IW7 307 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 DNAJC1Q96KC8 554 aaKnown RBP2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 C9orf85Q96MD7 179 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 RNF145Q96MT1 663 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 TAAR1Q96RJ0 339 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 P2RX4Q99571 388 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 C20orf85Q9H1P6 137 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 OR51V1Q9H2C8 321 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 PARLQ9H300 379 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 MOB1AQ9H8S9 216 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 REEP1Q9H902 201 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 SIAEQ9HAT2 523 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 MRPL40Q9NQ50 206 aaKnown RBP2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 MIEF1Q9NQG6 463 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 SLC39A1Q9NY26 324 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 ARMCX1Q9P291 453 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 APOBEC3BQ9UH17 382 aaKnown RBP2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 CIDEBQ9UHD4 219 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 RARRES3Q9UL19 164 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 MGAT4AQ9UM21 535 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 TFR2Q9UP52 801 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 CFL2Q9Y281 166 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 WIF1Q9Y5W5 379 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 MCM3APO60318 1980 aa2.44□□□□□ -2.02
DEPDC1-204ENST00000489862 LOC105371267A0A1B0GV96 52 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 TMEM114B3SHH9 223 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 ANKRD65E5RJM6 399 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 TGOLN2O43493 480 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 ATP6V1G2O95670 118 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 IGKV1D-16P01601 117 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 OR8U8P0C7N1 319 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 SLC35E2P0CK97 266 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 CT45A6P0DMU7 189 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 CT45A5P0DMU8 189 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 CT45A7P0DMV0 189 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 CCL5P13501 91 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 CAPN2P17655 700 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 GCKP35557 465 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 GPR6P46095 362 aaPredicted RBP2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 TUFMP49411 452 aaKnown RBP2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 NUTF2P61970 127 aaKnown RBP2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 MLLT11Q13015 90 aaPredicted RBP2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 ZNF266Q14584 549 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 OR7A5Q15622 319 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 C4orf26Q17RF5 130 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 ZFP69Q49AA0 526 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 CT45A1Q5HYN5 189 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 RBM48Q5RL73 367 aaKnown RBP2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 ADAMTSL4-AS1Q5T5F5 129 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 MEDAGQ5VYS4 303 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 MED27Q6P2C8 311 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 WDR82Q6UXN9 313 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 MTERF4Q7Z6M4 381 aaKnown RBP2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 NAXDQ8IW45 347 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 ZNF740Q8NDX6 193 aa2.43□□□□□ -2.02
DEPDC1-204ENST00000489862 OR13G1Q8NGZ3 307 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms