RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 ADAM29Q9UKF5 820 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 POMT1Q9Y6A1 747 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 COL6A3P12111 3177 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 ELOA3CA0A087WX78 387 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-229ENST00000488765 HRKO00198 91 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 SLC31A1O15431 190 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 SIAH2O43255 324 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 OR3A1P47881 315 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 ELLP55199 621 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-229ENST00000488765 RAB11AP62491 216 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 CDK3Q00526 305 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 COL10A1Q03692 680 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 TDRG1Q3Y452 100 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 C1QL3Q5VWW1 255 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 NPSR1Q6W5P4 371 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 Q6ZVH6 145 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 CPEB3Q8NE35 698 aaKnown RBP14.34□□□□□ -0.11
MCF2L-229ENST00000488765 RPS4Y2Q8TD47 263 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 AQP3Q92482 292 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 NOL4LQ96MY1 436 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-229ENST00000488765 NIPSNAP3BQ9BS92 247 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 SLCO5A1Q9H2Y9 848 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 STARD5Q9NSY2 213 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 GPR132Q9UNW8 380 aa14.34□□□□□ -0.11
MCF2L-229ENST00000488765 MED12Q93074 2177 aa14.33□□□□□ -0.11
MCF2L-229ENST00000488765 IGKV1D-16P01601 117 aa14.33□□□□□ -0.12
MCF2L-229ENST00000488765 PET100P0DJ07 73 aa14.33□□□□□ -0.12
MCF2L-229ENST00000488765 MRPS11P82912 194 aaKnown RBP14.33□□□□□ -0.12
MCF2L-229ENST00000488765 MLF2Q15773 248 aaPredicted RBP14.33□□□□□ -0.12
MCF2L-229ENST00000488765 DGAT2L6Q6ZPD8 337 aa14.33□□□□□ -0.12
MCF2L-229ENST00000488765 OR4C3Q8NH37 302 aa14.33□□□□□ -0.12
MCF2L-229ENST00000488765 PLA2G3Q9NZ20 509 aa14.33□□□□□ -0.12
MCF2L-229ENST00000488765 B3GALT1Q9Y5Z6 326 aa14.33□□□□□ -0.12
MCF2L-229ENST00000488765 FCARP24071 287 aa14.33□□□□□ -0.12
MCF2L-229ENST00000488765 EMP2P54851 167 aa14.33□□□□□ -0.12
MCF2L-229ENST00000488765 ERVS71-1P61550 626 aa14.33□□□□□ -0.12
MCF2L-229ENST00000488765 FAM166AQ6J272 317 aa14.33□□□□□ -0.12
MCF2L-229ENST00000488765 OR4X1Q8NH49 305 aa14.33□□□□□ -0.12
MCF2L-229ENST00000488765 EHFQ9NZC4 300 aa14.33□□□□□ -0.12
MCF2L-229ENST00000488765 FGF17O60258 216 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 SSBP1Q04837 148 aaKnown RBP14.32□□□□□ -0.12
MCF2L-229ENST00000488765 RUNX2Q13950 521 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 TMEM176BQ3YBM2 270 aaPredicted RBP14.32□□□□□ -0.12
MCF2L-229ENST00000488765 OR2AJ1Q8NGZ0 328 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 OR5R1Q8NH85 324 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 HIST1H2AAQ96QV6 131 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 DNAJB12Q9NXW2 375 aaKnown RBP14.32□□□□□ -0.12
MCF2L-229ENST00000488765 LRIT1Q9P2V4 623 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 TAAR5O14804 337 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 SLC16A7O60669 478 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 AMY2BP19961 511 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 TOMM20Q15388 145 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 TMEM217Q8N7C4 229 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 TOMM40LQ969M1 308 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 CABLES2Q9BTV7 478 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 SUSD2Q9UGT4 822 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 WSB1Q9Y6I7 421 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 A0A1W2PP55 124 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 RPL36A-HNRNPH2H7BZ11 118 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 VSIG8P0DPA2 414 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 RBMXP38159 391 aaKnown RBP14.32□□□□□ -0.12
MCF2L-229ENST00000488765 POLR2HP52434 150 aaKnown RBP14.32□□□□□ -0.12
MCF2L-229ENST00000488765 TRA2BP62995 288 aaKnown RBP14.32□□□□□ -0.12
MCF2L-229ENST00000488765 FAM3AP98173 230 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 ZNF774Q6NX45 483 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 OR5T1Q8NG75 326 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 OR2G3Q8NGZ4 309 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 FNDC9Q8TBE3 224 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 CXorf40AQ8TE69 158 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 TRIM2Q9C040 744 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 ASCL3Q9NQ33 180 aa14.32□□□□□ -0.12
MCF2L-229ENST00000488765 RAD51DO75771 328 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 RUNX1Q01196 453 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 SLC17A1Q14916 467 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 TMEM35AQ53FP2 167 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 ZNF66Q6ZN08 573 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 COMMD2Q86X83 199 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 OR13G1Q8NGZ3 307 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 LYPD6BQ8NI32 183 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 GPR173Q9NS66 373 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 CABIN1Q9Y6J0 2220 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 ZFP92A6NM28 416 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 TRAPPC6AO75865 159 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 LMO1P25800 156 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 RPS4XP62701 263 aaKnown RBP14.31□□□□□ -0.12
MCF2L-229ENST00000488765 VAMP2P63027 116 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 CSNK2A1P68400 391 aaPredicted RBP14.31□□□□□ -0.12
MCF2L-229ENST00000488765 SLC22A25Q6T423 547 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 CSNK2A3Q8NEV1 391 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 OR5H2Q8NGV7 314 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 FOXQ1Q9C009 403 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 VN1R1Q9GZP7 353 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 ZNF701Q9NV72 531 aaPredicted RBP14.31□□□□□ -0.12
MCF2L-229ENST00000488765 SERGEFQ9UGK8 458 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 HIF3AQ9Y2N7 669 aa14.31□□□□□ -0.12
MCF2L-229ENST00000488765 MRPS2Q9Y399 296 aaKnown RBP14.31□□□□□ -0.12
MCF2L-229ENST00000488765 A0A087WUJ7 227 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 LOC107986453A0A1B0GWG9 222 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 AQP7O14520 342 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 DFFBO76075 338 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms